Actinotignum timonense: CYJ17_0005420
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Entry
CYJ17_0005420 CDS
T09485
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
atim
Actinotignum timonense
Pathway
atim02024
Quorum sensing
atim03060
Protein export
atim03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CYJ17_0005420 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CYJ17_0005420 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CYJ17_0005420 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
atim02044
]
CYJ17_0005420 (ffh)
Enzymes [BR:
atim01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CYJ17_0005420 (ffh)
Secretion system [BR:
atim02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CYJ17_0005420 (ffh)
Eukaryotic Sec-SRP protein
CYJ17_0005420 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
nSTAND3
APS_kinase
cobW
AAA_33
AAA_31
AAA_16
AAA_25
AAA_18
ArsA_ATPase
NACHT
AAA_22
MeaB
Motif
Other DBs
NCBI-ProteinID:
WOS99277
LinkDB
All DBs
Position
1319263..1320825
Genome browser
AA seq
520 aa
AA seq
DB search
MFNNLSDRISGAFKNLRSKGVLTQADVETTISEIRRALLDADVALPVVREFTAAVRERAT
GAVRSQALNPSQQIVKIVNDELIEILGGETRELNFAQGRPTVVMLAGLQGAGKTTLAGKL
GRWFARGGRKALLVASDLQRPNAVQQLQVVGERAGVDVWAPEPGNGVGDPIQVAASGVDY
AAANGYGAVVVDTAGRLGIDEVLMQQAADIRAAVNPDEVLFVIDAMIGQDAVATAKAFQD
GVGFTGVVITKLDGDTRGGAALSVRGVTGKPILFASTGEKLEDFERFHADRMASRILDMG
DILSLIERAEATWTQEQQRELSEKMSEGSFDLNDFLVQMNQIKRMGSLKKLMGMLPGMGQ
YREALEQWDESSMGRVEAIIQSMTPAERRTPKILNGSRRQRIARGSGTTVQEVNQLVQRF
EGAAKMMTQMSRGGGMPGMPGMPGVGGGSRKQKRAKKNVSGGKKGRSGNPAKRARQEAEA
AAARQRAEQGSAFGKGAQLPGAAQAGPDMASMEELKRFLK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaataatctttccgaccggatttccggtgcattcaagaatctgcgctccaagggt
gttctcacccaggcggatgtagaaaccaccattagcgagattcggcgtgccctcttggac
gccgacgtcgcgcttcccgtggtgcgcgaattcaccgccgcggtgcgcgaacgcgccacc
ggtgcggtgcgctcccaggccctcaacccgtcccagcagatcgtcaaaattgttaatgac
gaactcatcgagattctcggcggggaaactcgggaactgaattttgcgcaggggcggccc
accgtggtcatgctcgccggcctccagggcgcgggtaaaaccacgctggctggtaagctc
gggcgttggttcgcccgcgggggccgcaaggcgcttctcgtggcctccgatttgcagcgc
cccaacgccgtgcaacagctccaggtcgtgggtgaacgcgccggggtggatgtatgggct
cccgaacccggtaacggggtgggtgaccccatccaggtggccgccagtggcgtggactac
gccgccgcgaacggctacggcgccgtcgtggtggacaccgccgggcgtttgggtatcgac
gaggtcctcatgcagcaggccgccgatatccgggccgccgtcaatcccgacgaagtactc
ttcgttatcgatgccatgatcggccaggacgcggttgccaccgcgaaggccttccaagat
ggcgttggcttcaccggcgtggttatcaccaagctcgatggcgatacccgcggcggcgcg
gcgctctcggtgcgcggcgtgaccggcaaaccgattctcttcgcctccaccggtgaaaaa
ctggaagatttcgaacgcttccacgccgaccgcatggcttcccgcatcctcgatatgggc
gatattctctcccttatcgaacgggccgaagccacctggacgcaagaacagcagcgcgaa
ctctcggagaaaatgagcgaggggtccttcgacctcaatgacttcctcgtgcaaatgaat
caaatcaagcggatgggttccctcaagaaactcatggggatgctgcccggaatggggcag
taccgcgaagccctcgagcagtgggacgaatcctcgatggggcgcgtggaggccattatc
caatccatgacgcccgccgagcgccgtaccccgaaaatcctcaacggttcgcgccgtcag
cgcatcgctcgcggttcggggaccaccgtccaggaagtcaatcagctggtgcagcgcttt
gagggtgctgcgaaaatgatgacgcagatgagtcgcgggggcgggatgccgggaatgccc
ggcatgcccggcgttggcgggggctcacgcaaacagaaacgcgcgaagaagaacgtttcg
ggcggcaagaaggggcgttcggggaatccggcgaaacgcgcccgccaggaagccgaagca
gcggcggcacggcagcgtgccgaacagggctcggccttcggcaagggagctcagcttccc
ggcgctgctcaagcggggcccgatatggcaagtatggaagagctcaagcgcttccttaaa
taa
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