Actinotignum timonense: CYJ17_0005530
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Entry
CYJ17_0005530 CDS
T09485
Name
(GenBank) SHIRT domain-containing protein
Organism
atim
Actinotignum timonense
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHIRT
Pectate_lyase_5
DUF4179
Motif
Other DBs
NCBI-ProteinID:
WOS99298
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All DBs
Position
1342365..1346387
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AA seq
1340 aa
AA seq
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MKDRNNNVGKKIVAVVAAALLGFSTNALISPAFAATTVGTEQELRSAITAGQSVSLSADI
TLTGEIEIPSNADVSVEGQGHTITAGAPSTAPGGDDHYNMFRTAGGKVTFSDVTLDAAGK
RRGLWLGAGSDATLDKVAIKNGTTAGTRNFEGGAVYVLDAALNVTNDSVIENNSSIWSQA
TYDMRVADETKKDPAFGSLPGDTQSKKISQTPNGGAIYATGARSTVTISDSVLRTNQTKD
HSQDGAGVRGNEGNGGAIFMDGAATLVAERTSFIDNHVARVSTGGYQGGAIYAGDGTTAR
ITGSTINVGAPFNTGGFLRAFNAKVTVDNSDFTFTGRGDAYGISGGAFTSQNSALKINNS
RFVASDSSKVTFAGGFIDIVGTGSFELTNSQLTGRGSGNGKGLATFGGAIAFETGSSATA
VIQGSTIRDVHADSNGGAISLSTRIGEESAVNLRVVDSTISNAGTLVWGPATQVGGALFV
GPGNTVTLEGATLSSGRSGRGGLIYNQGSTTITGGTGPSKLSGGSVYSAVGAGIFNDGYL
KLDDMSLSGNKKGDWSVHQDHPSSIEVDGARIGEYPGLNVYANKDVIITPKARLDAGDVR
VIDGQSAVLLTGKLANQLNISLSENVKNASETPYAGQNEPAQRYIGYTVAKGVDGYVPGA
DDANTVHYVTRDNRQAAAEFGDHTGAGSWDYVISDEGTVVLGQRATMWYHPNEGHFDAQA
QNAEAEQPYTIYSSTKLLQEHPAARPAQMTPYQGANPVREEKRTITDSLGRTAELGTYTF
VGWYCSTVTPTEIAGGQANDKGYDFAQAFTDGAATNSVTDAKGHKNPCTVASRVFGSETV
RSEPAPSQPAAPITQIVEPHELTAYAGYAPAYGVTSTFVSGTAGKDLPEGVKKQTPAIDT
KNGAGYTEGETVKPADAAGFTAVPDGNGKWTFQGWDASSKKITGADQDFTGTWVWQQQLF
KVTHEFRAADGANKALPAALAARTPADNLGENGKGFPKGTLVTPTDTFDKAKYSDTPGEV
WSFTGWDRASDTITDADVHFLGTWGLTLYPQPAIMGSYGEWQDEQVTCEKNTVTQTRIKT
MYTVFWNTTTLEWDKRGTTETETQEREKTPEEVKACTTVPTKDPTFTEWVDGEKSCETHQ
VAQSRTRTTYTYTWNAATLSYDETATPSTETQSRPMTAAEIKECAVEPDPEPEPGPQPPA
PGPQPEPGPQPEPGPAPQPDPGPGPCPEPDPQPDPQPEPSKQPTPRPDPHPSVTPTVPGT
PSLEPTGEPSLIPTPEQTPTAGQPSNPAPVPTAEQRPTPTAERSQRLVHTGSGAGAAIGA
ALLSMLLGAGALGYRRSERR
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagataggaataacaacgtgggcaagaaaattgttgcggtagtagccgcggccctc
cttggtttttcaacgaatgctctgatatccccagcctttgcggcgacaacggtggggacg
gagcaggagctccgcagcgccatcactgccggtcagagcgtgagcctgagcgcagacatc
acgctcaccggcgaaattgagatcccgagtaacgcggatgtgagcgttgagggccagggt
cataccattacggccggggcaccgagcaccgcgccgggcggggacgatcattacaatatg
ttccgcaccgcgggcgggaaggtgaccttctccgacgtcacccttgatgctgctggcaaa
cggcgcgggctgtggctcggtgccggttccgatgccacccttgacaaggtggcgatcaag
aacggcacaaccgcgggaacccggaatttcgaaggcggggccgtctacgttcttgacgct
gccctgaacgtgaccaacgattcggtaatcgaaaacaattcgagtatctggtcgcaggcc
acctacgatatgcgggtcgcggatgagacgaagaaggatcccgcctttgggagtcttcct
ggtgatacacagagcaagaaaattagccagacgcctaacggtggggcgatttacgcgacc
ggtgcgcgctccacggtgaccatcagcgattccgtgctccgtactaaccagacgaaggat
cattcgcaggacggtgcgggggtacgcggcaacgaagggaacggcggcgccatcttcatg
gacggtgcggccacgctggtggcggagcggacctccttcattgataaccacgtcgcccgg
gtctccaccggtggataccaaggcggtgcgatttatgcgggtgacgggacgacggcgcgc
atcaccggcagcaccatcaacgttggcgcacccttcaataccggcgggttcctccgtgcc
ttcaatgcgaaagtcaccgtagataacagtgatttcaccttcacggggcggggggatgcc
tacggaatttccggcggtgcttttaccagccagaactcggcgctaaaaatcaataattcg
cgcttcgtggccagtgatagctccaaggtgactttcgccggcggtttcatcgatatcgtc
ggcaccggaagtttcgaactcactaattcgcaactaacggggcgcggcagcggcaacgga
aagggcctggccaccttcggcggcgctattgccttcgaaaccggatcgagtgccaccgcg
gtgatccaaggctccaccattcgcgatgtgcacgccgattccaacggcggtgcaatttcg
ctttctacccggatcggtgaagaatccgcggtcaatctccgcgttgttgattccacgatt
tccaatgccggaaccttggtctggggacccgccacgcaagttggcggcgcgctcttcgta
ggcccgggaaatacggtaacgctggaaggtgcgacgctcagctccgggcgctcgggccgc
ggcggtctcatctacaaccaaggatcgaccaccattaccggcgggacggggccctcgaag
ctctcgggtggctctgtctattcggcagttggcgcgggtattttcaatgacggctacctg
aaactcgacgatatgagtctgagcggcaacaagaagggcgactggtcagtacaccaggac
catccctcgagcatcgaagtggatggtgcccggatcggggagtacccgggcttgaatgtg
tacgccaataaggacgtgatcatcactcccaaggcgcgccttgatgccggtgacgtgcgg
gtgatcgatggacaatctgcggtgctcctgacgggcaagctcgccaaccagctcaatatt
tccctcagcgagaatgtcaagaatgccagtgaaacgccctacgccgggcaaaacgagccg
gcgcagcgctacatcggctatacggtggcgaagggtgtggacggctacgtacccggcgca
gatgacgcgaatacggtccactatgtcactcgtgataaccgccaggctgccgcggaattc
ggtgatcatacgggtgcgggttcctgggattacgtgatttccgatgagggcaccgtggtt
ctcgggcagcgcgccacgatgtggtaccaccccaatgaggggcatttcgatgcccaagcg
cagaacgctgaggcagaacagccctatacgatctattcctcgacaaagctccttcaggag
cacccggcggcgcgccctgcccaaatgaccccgtaccagggcgcgaacccggttcgcgag
gagaagcgcaccattaccgacagcctgggccgcaccgccgagctcggcacctacacattc
gtagggtggtattgctccaccgtcactcccaccgaaattgcgggcgggcaggcgaacgat
aaaggatacgatttcgcgcaggcctttaccgacggcgccgccactaactccgtgaccgac
gccaaggggcacaagaacccgtgcacggtcgccagccgagtatttggcagcgagacggtg
cgctctgagcccgcaccgtcacagcctgctgcccctatcacgcagattgtggaaccgcat
gagctcacggcctacgcgggctacgctcccgcttatggtgtgacctctacattcgtgagc
ggtaccgccggcaaggacctccctgaaggcgtgaagaagcagacgcccgctatcgacacc
aagaacggtgctggctatacggagggcgagacggtgaaaccggcggatgcggcaggcttc
acggcagtgcccgatggtaacggcaagtggaccttccaaggctgggatgcgagcagcaaa
aagatcaccggtgccgatcaggacttcaccggtacttgggtgtggcagcagcagctcttc
aaggtaacccacgaattccgagcggctgacggcgctaacaaagcgctgcccgcagcgcta
gcggcgcgcactcccgccgataacctcggtgagaatggcaagggtttcccgaagggaaca
cttgttaccccaaccgacaccttcgataaggcgaaatactcggatactcccggggaagtc
tggtctttcacggggtgggaccgcgcgagcgacaccattaccgatgccgacgttcacttc
cttggcacctggggcctgactctctatccgcagccggccatcatgggaagctacggtgaa
tggcaagatgagcaggttacctgcgagaaaaataccgtgacgcagacccgcatcaagacc
atgtatacggttttctggaataccaccaccctggagtgggataagcgcggtactactgaa
acggagactcaggagcgggagaagacgccggaggaagtgaaggcttgcacgacggtgccc
accaaggacccgacgttcaccgagtgggttgatggggagaaatcctgcgagactcaccag
gtggctcaatcccgcaccaggaccacgtatacgtatacctggaatgcggctaccttgagc
tacgacgaaacagcgacgccgagcaccgagacgcaatctcggccaatgaccgctgcggaa
atcaaggaatgcgcggtggagccagatccggagccggagcctgggccgcagccacccgca
ccggggccgcaaccggaacctggtccacaacctgaaccggggccggcaccgcagcccgat
ccagggccggggccgtgcccggagccggatccccaaccggatccgcaaccggaaccgagc
aagcagcctacgccgcgtcctgatccgcacccgagtgttacgccgacggtgcctggaacg
ccgagcctcgagcctaccggggagccgagtctgattccgacaccggagcagacgccgacg
gctgggcagccatccaatccggcgccggtgcctacagcggagcaaaggcccacgccaaca
gctgagcgctcgcagcgactcgtgcatacagggagcggggctggcgccgccattggcgca
gccctcctctcgatgctcctgggggctggtgccctgggttatcgacgtagtgagcgtcgc
taa
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