Actinotignum timonense: CYJ17_0005605
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Entry
CYJ17_0005605 CDS
T09485
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
atim
Actinotignum timonense
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atim03016
]
CYJ17_0005605 (truB)
Enzymes [BR:
atim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CYJ17_0005605 (truB)
Transfer RNA biogenesis [BR:
atim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CYJ17_0005605 (truB)
Prokaryotic type
CYJ17_0005605 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WOS99311
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All DBs
Position
1362537..1363667
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AA seq
376 aa
AA seq
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MKPMRQNPWPDLPRAQHPAPSGVLVIDKPAGVTSHDVVAALRRLCGIRKVGHAGTLDPMA
TGVLVVGIGAGTRLLTYLSGADKDYRATFTLGIGSDTEDCTGTVTSAPGFSGTTAQLDAA
LASLQGDISQVPSAYSAKKIAGQRAYDLARAGQDVVLEAVPIHIARLERSGELRWRQSQV
SGTAALDGPALTDSPAQFDGAAPVEAQAGAVPVADVDVEVSCSSGTYVRALARDTGIALG
SAALMSALRRTRVGGFRQDEAVSVAELAQLVRGGAQPSVIPLAQVAARALPTVQIEAAEA
ESVRHGQFLEARGRAVAPAVGMAQSRTVGAGTVSGQAPGAESEAGTVALLHGDELVAVAR
RHGDSFRPATVFPPGA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgatgcgccagaatccctggcctgatctgccccgcgcgcagcatccggcgcca
agcggcgtcctagttattgataaaccagccggggtgacctcgcacgacgtggttgccgcg
ctgcgccgtctatgcggcatccgcaaagtggggcacgccggtactctcgacccgatggcc
accggggtgctcgtggtgggaatcggcgcgggtactcgactcctcacctacctgagcggg
gccgataaagattaccgggccacgttcacgctcggcatcggctccgataccgaggattgc
accggtaccgtcacatccgccccaggtttttccggtacgacggcgcagctcgacgctgcc
cttgcctcccttcagggtgatatttcgcaggtgccctccgcgtattcggccaagaagatc
gccgggcagcgtgcctacgacctggcccgggccgggcaggacgtggtgctcgaagcggtg
ccaatccatattgcccgcctggaacggagcggggagctccgctggcgccagtcgcaggtc
agcggtacggcggcgctggacggtccggctctgacagatagtccggcgcaattcgatggg
gcggcgccggtagaggctcaagcgggagctgtgccggttgcggatgttgatgtggaggtg
agctgctcctcgggtacgtacgtgcgcgcccttgcccgcgataccgggatagcgttggga
agcgcagcccttatgagcgcgctgcggcgtacccgcgtgggtggcttccggcaagacgag
gcggtgagcgtagcggaactggcgcaactggtgcggggcggggcgcagccctccgttatc
ccactggcgcaggtagcggctcgcgcactcccgacggtgcagatcgaggcagccgaagcc
gaatccgtgcgccacggccagttccttgaggcacgggggagagcagtggcccccgccgta
ggaatggcgcaatcgcgtactgtaggtgcgggaacggtatcgggacaagcacccggtgcg
gaaagcgaagctggcaccgtcgccctgctgcacggcgatgagcttgttgcggtggcacgc
cggcacggggattccttccggccggccaccgtattcccgcccggcgcataa
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