Actinotignum timonense: CYJ17_0005650
Help
Entry
CYJ17_0005650 CDS
T09485
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
atim
Actinotignum timonense
Pathway
atim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYJ17_0005650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atim03019
]
CYJ17_0005650
03016 Transfer RNA biogenesis [BR:
atim03016
]
CYJ17_0005650
Enzymes [BR:
atim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CYJ17_0005650
Messenger RNA biogenesis [BR:
atim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CYJ17_0005650
Transfer RNA biogenesis [BR:
atim03016
]
Prokaryotic type
tRNA degradation factors
CYJ17_0005650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
KH_1
PNPase
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
PCB_OB
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WOS99320
LinkDB
All DBs
Position
1374803..1377241
Genome browser
AA seq
812 aa
AA seq
DB search
MEGPNIHSVEAVVDNGSFGTRTIRFETGLLAQQANGAALAYLDGETTVFSATTASKSPKE
HFDFFPLTVDVEERSYAAGKIPGSFFRREGRPGTDAILAARLIDRPLRPLFTKGMRNEVQ
IVETVLSIHPDDAYDVLAINAASLSTSLTDLPFAGPVGGTRVSLVDGQWIAFPRWSEMAR
ATFSMDIAGRIVGDDVAITMVEAQAPEQTEANVAAGGIAPTEEVITQGLEAAKGVIRTLC
EAQLSLINECGKPTADYPFFPNYTDAQFEAVGNVLGDRFNTILGIVDKVERDTALNDLTD
QIVSELTVPADAQFNLEEDGPGLAAAVNDHFKEVMRRHVLTENVRMDGRRPTDIRSISAQ
AGVLPRVHGSAIFQRGETQILGVTTLNMLKMEQPLDNLSPITHKRYIHHYNFPPYCTGET
GRVGSPKRREIGHGHLAEMALESQLPSREEFPYAIRQVSETMGSNGSSSMGSVCASTMSL
LNAGVPLKAPVAGIAMGLISAQIDGETKYVTLTDILGAEDALGDMDFKVAGTRDYVTALQ
LDTKLDGIPAEVLSAALSQARDARLAILDLMNQAIDGPDEMAPTAPRILTVKIPVDKIGE
VIGPKGKMINQIQEDTGAEITIEDDGTVFIGAADGASAEAARDTVNSIANPQLPEVGERY
VGTVVKTTTFGAFISLTPGRDGLLHISQIRRLVGGKRVENVEDVLNVGDKVEVEIGEIDD
RGKISLEAVVPEGEANAEAESSDQGDNGAHGEAEESAPRQNRARSRSRRRSESSAPSAPS
ADDSDADSSSSRGSRGSRGSRRRRRTVHTDED
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
gtggagggtcccaatattcatagtgtggaagccgttgttgataacggctcctttggaaca
cgtactatccgtttcgaaaccgggctgctagcccagcaggccaacggcgccgccctggcc
tacctggacggggaaaccaccgttttctccgccaccaccgcttcgaaaagcccgaaggaa
cacttcgatttcttcccgctgacggtggatgtggaagaacgctcctacgcagcaggtaaa
attcccggttccttcttccgccgcgaaggcaggcccggtacggacgccattctggccgcc
cgcctcatcgaccgcccgctgcgcccgcttttcaccaagggcatgcgtaacgaagtgcag
atcgtggaaaccgtgctctccatccacccggatgatgcctacgacgttctcgcgatcaac
gccgcgtccctgtccacctcgctgacggatctgccctttgccgggccggttggtggcacc
cgcgtgtccctcgtggacgggcagtggatcgccttcccgcgctggtcggaaatggcgcgc
gccaccttctctatggatattgccgggcgtattgttggggacgacgtcgccatcaccatg
gtggaggcccaagctcccgaacaaacggaagcgaacgtggccgccggtggcattgccccc
accgaagaagttattacccagggcctggaagctgccaagggcgttatccgcaccctctgc
gaagcgcagctcagcctcatcaacgaatgcgggaagcccaccgcggactaccccttcttc
ccgaattacaccgacgcccagttcgaggccgtcggcaatgttcttggtgatcgtttcaac
accatcctcgggattgtggacaaggtggagcgcgataccgcactcaatgacctcaccgat
cagatcgtttccgagctgacggtgcccgccgatgcccagttcaacctggaagaagacggc
cccgggctcgccgccgcggtcaatgaccacttcaaggaagtcatgcgccgccacgtcctc
accgaaaacgtgcgtatggacgggcgccgccccaccgatattcgttcgatttccgcgcag
gccggtgtgctgccgcgcgtgcacggctcggcgatcttccagcgtggcgaaacccagatc
ctcggggtaaccaccctcaatatgctcaagatggagcagccgctggataatctttccccg
attacccacaagcgctacatccaccactacaacttcccgccctactgcaccggcgaaacc
gggcgcgtgggcagccccaagcgccgcgaaatcgggcacgggcacctggccgaaatggcg
ctggaatcccagctgcccagccgcgaggaattcccctacgcgatccgccaggtctccgag
acgatgggctcgaacggctcgtcttccatgggttcggtgtgtgcctccacgatgtccctg
ctcaacgcgggtgtgccgctcaaggccccggttgccggtatcgccatgggccttatttcc
gctcagattgacggggaaaccaagtacgtgaccctcaccgatattctcggtgcggaagat
gccctgggcgatatggacttcaaggtggccggcacccgcgactacgtgaccgcgctgcag
ctggacaccaagctggacggcatccccgcggaagtcctctccgcggcgctgtcccaggcc
cgtgacgcccggctggccatcctcgatctcatgaaccaggccattgacggccccgatgag
atggcgcccaccgccccccgtatcctcaccgtgaagatcccggtggataagatcggcgaa
gtcatcggccccaagggcaagatgatcaaccagatccaggaagataccggcgcggaaatc
accatcgaggatgacggcaccgtcttcattggtgctgccgacggcgcctccgcggaagcc
gctcgtgacacggtcaattccatcgccaacccgcagctccccgaagtgggcgaacgctac
gtgggtaccgtggtcaagaccaccactttcggtgcgttcatctccctcaccccgggccgc
gacggcctcctccacatctcccagattcgccgcctcgtgggtggcaagcgcgtggagaac
gtggaagatgtcctcaatgtgggcgacaaggtcgaggtcgaaatcggcgaaatcgatgat
cgcggcaagatctccctggaagcggtcgttccggaaggcgaagcgaacgccgaagcggaa
agctccgatcagggcgataacggcgctcacggcgaagcggaggagagcgccccgcggcag
aaccgggcgcgttcccgttcgcgccggcgcagcgagtcctcggcgcccagcgcaccctcg
gcagacgactccgatgctgactccagctcaagtcgcggttcgcgtggaagtcgcggttcg
cggcggcgtcgtcgcaccgtccacacggacgaagactaa
DBGET
integrated database retrieval system
