Actinotignum timonense: CYJ17_0006010
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Entry
CYJ17_0006010 CDS
T09485
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
atim
Actinotignum timonense
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atim03032
]
CYJ17_0006010
03036 Chromosome and associated proteins [BR:
atim03036
]
CYJ17_0006010
03400 DNA repair and recombination proteins [BR:
atim03400
]
CYJ17_0006010
DNA replication proteins [BR:
atim03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CYJ17_0006010
Chromosome and associated proteins [BR:
atim03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CYJ17_0006010
DNA repair and recombination proteins [BR:
atim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CYJ17_0006010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
WOS99391
LinkDB
All DBs
Position
1464332..1464616
Genome browser
AA seq
94 aa
AA seq
DB search
MSVNRTELIAAIADRSGLSKSDADKVIAALQEVLVDSLSKGEAVKITGLLSVERTERAAR
KGRNPRTGEEIEIPAGFGVKISAGSNLKKAVSNK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttaaccgcacagagctcatcgcagctatcgccgaccgttccggcctgtccaag
tccgatgccgataaggtgatcgccgcgctccaggaagtgctcgtcgattcgctttccaag
ggcgaagccgtgaagatcaccggcctgctctccgtggagcgcaccgagcgcgccgcccgc
aagggccgcaacccccgcaccggtgaagaaatcgagattcccgccggtttcggcgtgaag
atctcggctggatccaacctcaagaaggctgtgtccaacaagtag
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integrated database retrieval system
