Actinotignum timonense: CYJ17_0006365
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Entry
CYJ17_0006365 CDS
T09485
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
atim
Actinotignum timonense
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atim03400
]
CYJ17_0006365
DNA repair and recombination proteins [BR:
atim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
CYJ17_0006365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
AAA_11
FtsK_SpoIIIE
ResIII
AAA_16
AAA_10
P-loop_TraG
AAA_19
AAA_7
AAA_6
Motif
Other DBs
NCBI-ProteinID:
WOS99454
LinkDB
All DBs
Position
complement(1535826..1537724)
Genome browser
AA seq
632 aa
AA seq
DB search
MNDADIARLRAEAAEAAAKAARAEAELAQARLDAALAATIATDTPPTTTAQAASDIAGNT
PTGNTTETATAAEKRPPVQPAASSPQDSPEQSPQPTNDDYASEVARSYQVSGPALTLGAY
LDSAGNPRPDVLVRLPFASFNRHGLVCGATGTGKTRTLQLLAEQLSAAGVAVFLTDIKGD
LSGLCEAGTASDKLTARTRALGQEWAGASFPLHLYSLTETTGVPLRSTVEDFGALLLARA
LKLNDTQESALALVFAWAEQEDLRLYTLEDLREVLHYLTTDGKAELSGIGGVSTATAGVI
LREVSALAAQGGDMFFQRPSFSPSELITHEGERGVISALELPDVRDMPELFSTFTMWVLS
RLFSDLPEVGDTPLPRLVFFFDEAHLLFSGASRNFVDEVTRVVRLIRSKGVGVFFVTQTP
QDIPESVLAQLGTRIHHALRAHTPKDVKVLKETAKTFPFSPLDIAAVLPALGTGEAVVTG
LGDDGAPTAVAPTRLWAPRSVMGPASPAALSTALGKTPRPAPLSGEAASEGAARAVAERR
AQLEAAAAAAKEAEEQRRTEEAAAKKAAREAEKKLAAAEREAERAAQRAQRNAEKEAERQ
ARRRDAAIDSVVRSAGRSLGRSIINSIFGRRR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgccgatattgcccgcttgcgcgccgaggcggccgaagccgctgccaaagct
gcccgcgcggaagccgaactcgcccaggctcgcctcgatgccgcactcgccgccacaatt
gccactgataccccgcccaccaccacggcacaggccgcatccgatattgcgggaaacacg
ccgacagggaacaccactgaaaccgccaccgcggcagagaagcgcccacccgtgcagccg
gcggcgtcgtcgccgcaagactccccggaacaatccccgcaacccaccaatgacgattac
gcgagcgaggtggcgcgcagctaccaggtatccggcccggctctcaccctgggcgcctac
ctggattcggccgggaatccgcggcccgacgtgctggtgcggctgcctttcgcgagtttc
aatcggcacgggctggtgtgcggggcaaccggaaccgggaaaactcgtaccctccagctg
ctggctgaacagctgagcgcggccggcgtggccgtgttccttaccgatattaagggcgat
ctttccggcttgtgcgaggcgggcacggcttccgataagctcacggcacgcacccgggct
ctggggcaggaatgggcgggggcctcgttcccgctgcatctgtattccctcaccgaaacg
accggggtgccgctgcggtccacggtggaggatttcggtgcgttgctgctggcgcgggcc
ctgaaactaaatgacacccaggaatcggcactggctttggttttcgcgtgggcggagcag
gaggatctgcgcctgtacaccctggaggacctgcgcgaggtgctccattatttgactacg
gatgggaaggcggagctttccggcatcggcggggtgtcgaccgcgaccgccggggtgatt
ttgcgcgaggtctccgcactggcggcgcagggtggggatatgttcttccagcgcccgtcc
ttcagcccgagcgaactcattacccacgaaggcgagcgcggcgttatttccgcccttgag
ctaccggacgtacgcgatatgcccgaacttttctccacgttcacgatgtgggtgctcagc
cggctcttttccgacctgcccgaggtgggcgatactcccctgccccgcctggtgtttttc
ttcgacgaagcgcatctgctgttctccggggcgtcccggaacttcgtggacgaagtaacc
cgggtggtgcgcctcatccgttccaagggcgtaggtgttttcttcgtcacccaaaccccg
caggatattcccgaatcggtgctcgcgcagctgggcacccggattcaccatgccctgcgc
gcccacacccccaaggacgtcaaggttctcaaggaaacggcaaaaactttccccttctcg
cccctggatattgcggccgtgctgcccgcgctagggaccggtgaagctgtggtcacgggt
ttgggcgacgacggcgcccctacggccgtggccccgacccggctgtgggcgccgcgctcc
gtcatgggcccggccagcccggctgccttgagcacagccctagggaaaacaccccggcct
gctcctctttccggggaggccgcgagcgagggcgcggcccgcgcggttgccgagcggcgc
gcgcagctggaagccgcggcggcggcagctaaagaagctgaagagcaacggcggaccgag
gaggctgcggcgaagaaggccgcccgcgaggcggagaaaaagctggcggccgccgaacgc
gaagccgagcgggccgcccagcgggctcagcggaatgccgagaaggaggctgagcgccag
gcgcggcgccgcgatgccgccatcgattcggtggtgcgcagcgccgggcggtccctgggc
cgctcgattattaattcgattttcgggcggcgccgctag
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