Actinotignum timonense: CYJ17_0006380
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Entry
CYJ17_0006380 CDS
T09485
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
atim
Actinotignum timonense
Pathway
atim03030
DNA replication
atim03430
Mismatch repair
atim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CYJ17_0006380 (holA)
03430 Mismatch repair
CYJ17_0006380 (holA)
03440 Homologous recombination
CYJ17_0006380 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atim03032
]
CYJ17_0006380 (holA)
03400 DNA repair and recombination proteins [BR:
atim03400
]
CYJ17_0006380 (holA)
Enzymes [BR:
atim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CYJ17_0006380 (holA)
DNA replication proteins [BR:
atim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CYJ17_0006380 (holA)
DNA repair and recombination proteins [BR:
atim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CYJ17_0006380 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
AA_kinase
DNA_pol3_gamma3
DurN
4_1_CTD
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
WOS99456
LinkDB
All DBs
Position
1541346..1542323
Genome browser
AA seq
325 aa
AA seq
DB search
MAAKERTVGYDALRLEPVILIIGAEPVLAERAWARLVRLARQAHPEVQVVRLDAASYERG
SLALHTSPSLFGDHRIVAVTGAEHMNDAFLAEMLAYLPQPNADIPVIIQHGGGTRGKKLL
DAIAAGGWQVARIEKIKRDDDKARLVTADVRAAGRKITDGAVRALVDALGQDLRELLSAT
AQLLADVEGMITEDHIRDFYAGRNEATPFEIADAALAGRTGQALALARHAFATRVNPVPI
VAALAAKLRQLAIVQAPGISQKELKMAPWQAQRARREARGWSDAGLGQAIRAVALADEQV
KGASRDPQYAVEHAIIAIGRARRGR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagaacgcaccgtcgggtacgacgccctccgcttagaaccggtcatcctc
attattggtgcagagccggtgctggccgagcgcgcctgggctcggctcgtgcgcctcgct
cgccaagcacaccccgaggtgcaggtcgtgcgcctggacgctgcctcctacgagcgcggc
tccctcgccctccacacctcaccctcacttttcggggaccaccgcatcgtcgccgtgacc
ggcgccgaacacatgaacgacgcgttcctggcggaaatgctcgcctacctcccgcaaccc
aacgcggatatccccgtgattatccaacacgggggaggcactcgcggtaaaaaactcctc
gatgccatcgcggcggggggctggcaggtagcccgcatcgaaaaaatcaaacgcgatgat
gataaagcgcgtttggtgacggcggatgtgcgagccgccgggcgcaaaatcacggacggc
gcggtgcgggccctcgttgatgcactcggccaggacctgcgcgaactactcagtgctacc
gcccagctcctcgccgatgtggaggggatgatcaccgaagaccatattcgggatttctac
gccgggcgtaatgaagcaaccccctttgagatcgcggacgcggccctggcagggcgcacc
ggccaagctctagcgctggcccgccacgctttcgccacccgggtcaatcccgtccctatc
gtggccgcgctcgcggcgaaactgcgccagctcgccatcgtccaggcaccgggaatcagc
cagaaggaattgaaaatggcgccctggcaagctcagcgggctcgccgcgaagcccgcgga
tggagcgatgccgggctcgggcaagccatccgagcggtggcgctggccgatgaacaggtc
aagggtgcctcccgcgatccgcagtacgccgtggaacacgcgattattgccatcgggcga
gcccggcgcggcaggtag
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