Actinotignum timonense: CYJ17_0006960
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Entry
CYJ17_0006960 CDS
T09485
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
atim
Actinotignum timonense
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atim03036
]
CYJ17_0006960 (xerD)
Chromosome and associated proteins [BR:
atim03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CYJ17_0006960 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF5888
Motif
Other DBs
NCBI-ProteinID:
WOS99567
LinkDB
All DBs
Position
complement(1673083..1674006)
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AA seq
307 aa
AA seq
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MAEPGTPPLQRAVTQFLAHITVERALSRNTVAAYRRDLRKYLAHLDSRGVTSPAEVREED
VASFSETLTGMAPASIARAVTAVRAFHTFLYDDGASPANPASRVRPPKLPARLPEALTIA
EVTAMIEAAGATPPPLGLRDHALLEVLYGTGARISEALGLTADDIDTETATIRLFGKGRK
ERVVPLGRYALEALDAYTTRARPELAARGEGVTTLFLNTRGRALSRQSAWLIIRQAAERA
GITTHVSPHSLRHSFATHLLQGGADVRVVQELLGHSSVTTTQIYTQVSREVLKEVYATSH
PRALRSE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacccggcaccccgcccctacagcgcgcggttacgcaattcctcgcccatatc
accgtcgaacgcgcgttatcgcgcaataccgtggccgcttatcggcgtgatttgcgtaaa
tatcttgcgcacctagattcccgcggcgtcaccagccccgccgaggtgcgcgaagaggac
gtcgcgtccttttccgaaacgctcaccggaatggccccggcttctattgcgcgggccgtg
accgcggtgcgggcttttcatacgtttttatacgacgacggcgccagcccggccaatccg
gccagccgggtgcgtcccccgaaactccccgcgcgcctgcccgaagctctgacaatcgcg
gaggtcaccgccatgattgaggcggccggggccaccccgccgcccctgggcctgcgcgac
cacgcactcctggaagtcctgtacgggacgggcgcgcgcatttccgaagccctcgggctc
accgctgatgatattgatacggagacggccacgattcggcttttcggcaagggtcgcaaa
gaacgggtggtgccgctcgggcgctacgccctggaagccctggatgcctacaccacccgg
gcccgcccggagctggccgcgcgcggggaaggcgtaaccacactcttcctcaatacccgc
gggcgggccctttcccgccagagcgcctggctcattattcgccaggctgccgagcgtgcc
ggtataaccacccatgtgtccccgcattcgctgcggcattcttttgccacccacctgctc
cagggcggcgcggatgtgcgggtggtccaggagctgctcgggcattcctcggtgaccacc
acccagatttatacccaggtttcccgcgaggtactcaaggaggtgtatgccacctcgcac
ccgcgggcactgcgcagtgagtag
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