Actinotignum timonense: CYJ17_0007435
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Entry
CYJ17_0007435 CDS
T09485
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
atim
Actinotignum timonense
Pathway
atim03060
Protein export
atim03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CYJ17_0007435 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CYJ17_0007435 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
atim02044
]
CYJ17_0007435 (secD)
Secretion system [BR:
atim02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CYJ17_0007435 (secD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD_1st
SecD_SecF_C
MMPL
ACR_tran
EF-hand_5
Nitr_red_alph_N
EF-hand_1
Motif
Other DBs
NCBI-ProteinID:
WOS99653
LinkDB
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Position
complement(1786123..1787862)
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AA seq
579 aa
AA seq
DB search
MSQSKNSGVRLSWRRIITLAILAIALFVSLGVGSVTGSGSESRWTPNFALDLEGGTELIL
TPKTTDNSEITSEDVNQAIEIIRQRVDASGVAEAEITSQGGSNIVVGLPGHPSQETLDLV
RNSAVLRMRPVLAMANPGTMKGEGENAAPLTGTALEEAAMKAADADGDGKLSTTPPSEPT
SASDPAWAKTERVTYDALTLDCTAENPATAPEENPDTALVACGQSEDSKTGEVTPYKYVL
GPAEIAGTNLTRATSGFDQQQGQWIVQLEFDNEGAQKFSEVTGRLVGLQSPQNQFAIVLD
GRVISSAVPQTQISGGQAVINGSGINATTSRVLANQLQFGSLPLEFEVQSEQQISATLGS
ESLRAGLVAGLIGLVLIVLYLVWQYHALAIVAVGSVVLATGLSYGVICLLSWVMGYRLSM
AGVVGLVISIGITVDSFIVFFERIRDEIRDGHAVRTAVQRGWKRATRTIIASDSVNLIAA
GVLYFIAVGSVRGFAFTLGLTTILDLVVVFMFTYPLMTLLVRTKFFGGGHPASGMSAKHL
AHTPAYRGRKVPGEGSLAERRTRERRAALPASSEGKENA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatctaaaaattccggcgtccggttatcctggcgccggatcattacccttgcg
atcttggcgatcgcgctcttcgtctccctgggcgtgggctcggtaacgggatccggatcg
gaatcccggtggaccccgaatttcgccctcgacctggaaggcggcacggagcttattctc
accccgaagaccacggataattccgagatcacctcggaagatgtcaatcaggcgattgaa
attatccgccagcgcgtggacgcctcgggtgtggcagaagcggagatcacctcccagggt
ggatccaatattgtggtgggtctgcccgggcaccccagccaggaaaccctcgacctcgtg
cgtaattccgcggtgttgcggatgcgcccggtgctcgccatggcgaacccgggaaccatg
aagggcgagggcgagaatgccgcgcctctcaccggtaccgcgctggaagaagccgccatg
aaggccgccgacgcggacggggacggcaagctctccaccactccgcctagcgagcccacc
agcgcctcggatccggcctgggctaaaaccgagcgggtcacctacgatgcgctgactttg
gattgcaccgcggaaaaccccgccactgctccggaagaaaacccggataccgcgctggtg
gcttgcgggcaaagcgaagattccaagaccggtgaagtgacgccttataagtacgtgctc
ggcccggccgaaatcgccggaacgaacctgacgcgcgccacctccggtttcgatcagcag
cagggccagtggatcgtgcagctggaattcgataacgagggcgcccagaagttctccgaa
gtgaccgggcggctggtgggcttgcaaagtccccaaaaccaattcgctatcgtgttggac
ggtcgcgttatttcctccgcggtcccgcaaacccagatttcgggtggacaggccgttatt
aacggttccggtattaatgcgacgacgtcgcgcgtgctggccaaccagttgcaattcggt
tcgctacccctggaattcgaggtgcaatccgaacagcaaatttcggctaccctcggttcc
gaatcgctgcgcgcgggcctcgtggccgggctgatcggtcttgtgcttattgttctttac
ctcgtctggcagtaccacgccctcgccatcgtggcggtgggttcggtggtgcttgccacg
ggtctatcctacggggttatttgtttgctctcctgggtgatgggttaccgattgtcgatg
gccggcgtcgtcggcctggttatttctatcggtattacggtcgactccttcatcgtgttc
ttcgaacgtatccgcgatgagattcgtgacggacacgccgtccgcaccgcggtgcaacgc
ggttggaagcgcgcaacccgcacgattatcgcctccgactccgttaacctcatcgcggcc
ggggtgctctacttcatcgcggtgggctcggtgcgtggtttcgccttcactttggggctt
actactatcctcgacctcgtcgtcgtctttatgtttacctatccgcttatgacgctgctg
gtgcgcaccaagttcttcggcggggggcacccggcatcgggtatgtccgccaagcatttg
gcgcataccccggcgtaccgcggccgtaaggttcccggggaaggctcgctcgccgagcgt
cgcacccgggaacgccgggccgctctccccgcgagcagcgagggaaaggagaacgcctaa
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