Actinotignum timonense: CYJ17_0007610
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Entry
CYJ17_0007610 CDS
T09485
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
atim
Actinotignum timonense
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atim03032
]
CYJ17_0007610
03400 DNA repair and recombination proteins [BR:
atim03400
]
CYJ17_0007610
Enzymes [BR:
atim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CYJ17_0007610
DNA replication proteins [BR:
atim03032
]
Prokaryotic type
DNA Topoisomerases
CYJ17_0007610
DNA repair and recombination proteins [BR:
atim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CYJ17_0007610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
WOS99681
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Position
1818437..1820869
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AA seq
810 aa
AA seq
DB search
MPKNTSPAEHIVDINVSEEMRTSFLEYSYSVIYARALPDARDGLKPVQRRILFQMGQMGL
RPDRAHVKSSRVVGDVMGRLHPHGDTAIYDAMVRLAQPFTMRLPLVDGHGNFGSLDDGPA
ASRYTEARLAAPAMAMISSLDEDVVDMVPNYDNTLQQPEVLPAAIPNLLVNGSSGIAVGM
ATNIPPHNLIEVINGAKHLLRHPDASLEDIMRFIPGPDLPEGGKIIGLEGIREAYETGRG
IFRTRATARIEKISARKRGIVITELPYLVGPEKIIDKLKDAVNAKKIQGVSGVQNLTDRH
HGMRLVVEVKNGFHPEAVLAQLYQHTPLEDSFGINNVALVDGQPQTLGLLELLRVWIKHR
ITVTRRRSEHRLRAAQYDLHLVEGLLIAVLNIDEVIAVIRSSEDTAAARERLIAVFDLSE
AQADYILELRLRRLTKYSQIELEGRREELERTIAELEEILGSPERLREVVASEMTEVAQQ
FGTPRRTVLLESDGAASAAAPAALPLEVSDDPTWVLLSGTGLVARTAGGDAPERSGPRRA
HDAIISRVAATARGHIGVVTSHGRMIDLDVLTVPALPDTAGAPSLAGGTPIVDLISLDSG
ERVIGLAPLTAAEGDPVLTLATAHGRIKRVNGAYPNKESWEVITLAEGDSVVGCALAGDT
DQVVLMTSDAQLLRFEASLVRPQGRAGQGIAGIRCAEGAQVIALGVVPGDDLAGSLVATI
ASNAQALPGTEPGSAKVTPLDRFPAKGRGTGGVRAQRFLRGENMLAVAAIGPEPLRAITA
SGQPVELPEVEEKRDASGSALTVPVAAIGS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaatacgagtcccgcggaacatatcgtcgatattaacgtgtcggaggagatg
cgcacctccttcctcgagtactcctactcggtgatttacgcgcgtgccctccccgatgct
cgcgacggtctcaagccggtgcagcgccgtattctcttccagatggggcagatgggcctg
cgccccgaccgcgctcacgtgaagtcttcgcgcgtggtgggtgatgtgatggggcgcctc
cacccgcacggtgataccgctatttatgacgcgatggtgcgcctcgcccagccttttacc
atgcgcttgccgctggtggacgggcacggtaatttcggttcgctcgacgacgggccagct
gcctcgcgctataccgaggcacgcctggcggccccggccatggcgatgatttcttcgctg
gacgaggacgtcgtcgatatggtccccaattacgacaacaccctccagcaacccgaggtg
ctcccggccgccatcccgaatctgctggtcaatggttcctccggcatcgcggtgggaatg
gcgacgaatattccgccgcataatcttattgaggttattaacggggcgaagcacctgctg
cgccacccggatgcgagcctcgaagatattatgcgttttatccccggcccggacctgccc
gaaggcggcaaaattattggtttggagggcatccgggaggcgtacgaaaccgggcgcggt
attttccgtaccagggcgacggcgcgcatcgaaaaaatcagcgcccgtaagcgcggcatt
gttattacagaattgccctatcttgtgggtccggaaaagatcattgacaagctcaaggat
gccgttaacgccaagaaaattcagggggtctccggggtccaaaacctgaccgaccggcac
catggcatgcggctcgtcgtcgaagtaaaaaatgggttccaccccgaggcggtgctcgcc
cagctctaccagcacactccgctcgaggattctttcgggattaataatgtggctttggtt
gatggtcagccgcaaaccctggggctgctggaactgctgcgggtgtggattaagcatcgc
atcacggtgacgcgccggcgcagtgagcaccgtttacgggcagcgcaatatgatttgcac
ctggtggaaggcttactcatcgccgtcctcaatattgatgaggtaatcgcggttattcgt
tcttcggaggataccgcggcggcccgcgagcggctcatcgctgtttttgatctgtccgag
gcacaggccgattatattttggagctgcggctgcgccgcctcaccaagtactcccagatt
gagctggaagggcgccgcgaagagctcgagcgcaccatcgcggaactggaagaaatcctc
ggttcgcccgagcggctgcgggaggttgtggcttccgagatgacggaggtggcccagcag
ttcgggaccccgcggcgcaccgtgctgttggaatcggatggggcggccagcgcggcggca
ccggctgctctccccctggaagtttccgatgatccgacctgggtgctgctctcgggaacg
gggctggtggcgcgcaccgcgggcggcgatgctcccgagcgcagcggcccgcgccgggcc
cacgatgcgattatttcgcgagttgctgccacggcccgcgggcatatcggggtggtgacc
agccacgggcgcatgatcgacctggatgtgctcaccgtcccggcgcttcccgataccgcg
ggggctccctcgctggccgggggcaccccgatagtggatctgatttctctggattccggg
gagcgcgtgatcgggctggccccgcttaccgccgctgagggcgatccggttctcaccctg
gccaccgcgcacgggcggattaaacgggtgaacggcgcgtacccgaataaggaaagctgg
gaggttataaccctggccgagggcgatagcgtggtgggctgcgcccttgccggcgatacc
gatcaggtggtgctcatgacgagcgatgcgcaattattgcgctttgaggcatcactggtg
cgcccgcagggccgggcagggcagggtattgccgggattcgctgcgcggaaggcgcccag
gtgattgccctcggggtggtgcccggtgatgatcttgcaggttccctggtggccacgatt
gcctcgaatgcgcaggcgctcccgggtaccgaacctggcagcgcgaaggtgacgccgctg
gatcgtttcccggcgaagggccggggtacgggcggggtgcgcgctcagcgtttcctgcgc
ggggaaaatatgttggcggtggccgctatcggcccggagccgctgcgcgccatcacggcc
tccggccagcccgttgagctgcccgaggttgaagaaaagcgggatgcttcgggcagcgcc
ctgacggtcccggtggcggctatcggaagctag
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