Actinotignum timonense: CYJ17_0008960
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Entry
CYJ17_0008960 CDS
T09485
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
atim
Actinotignum timonense
Pathway
atim00521
Streptomycin biosynthesis
atim00523
Polyketide sugar unit biosynthesis
atim00541
Biosynthesis of various nucleotide sugars
atim01100
Metabolic pathways
atim01110
Biosynthesis of secondary metabolites
atim01250
Biosynthesis of nucleotide sugars
Module
atim_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CYJ17_0008960 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CYJ17_0008960 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CYJ17_0008960 (rfbC)
Enzymes [BR:
atim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CYJ17_0008960 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WOS99929
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Position
2135978..2136595
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AA seq
205 aa
AA seq
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MEIRELAIAGAWEITTKHFPDERGIFLEAYKSSVFEETIGHRLDVRQVNTSVSKAGTVRG
IHFADVPPSQAKYVMCPRGAVLDFVIDIRVGSPTFGKWDSVLLDDDTRKAIYISEGLGHC
FVALEDDSTVVYLCSAQYAPGREHGVNPLCSQVGLVFPETDRQGKKLELLLSPKDTDAPD
LDEAERSGLLPSYEDVQAFLATLRS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggagattcgggaattagcgattgcgggcgcatgggaaatcaccaccaagcatttcccc
gatgaacgcggtattttcttggaagcctacaaatcctctgtttttgaagaaacaatcggc
caccgtttggatgtgcgccaggtgaatacctcggtatccaaggccggcaccgttcgtggt
atccatttcgccgatgtgccgcccagccaggcgaagtacgtaatgtgcccgcgcggtgca
gttctcgatttcgttattgatattcgggtgggctcccccaccttcgggaagtgggattcc
gttcttctcgatgatgacacccggaaggcgatttatatttcggagggcctgggccactgc
ttcgtggccctggaagatgattccaccgtggtctacctgtgctcggcgcaatacgctccc
gggcgggaacacggggtgaatccgctgtgctcgcaggtgggcctggtattcccggaaact
gatcgccagggtaagaagcttgagctgctgctctccccgaaggataccgatgctcccgat
ctggatgaggccgaacgcagcgggctcctcccgagctatgaggatgtccaggctttcctc
gccaccttgcggagctaa
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