Actinotignum timonense: CYJ17_0009165
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Entry
CYJ17_0009165 CDS
T09485
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
atim
Actinotignum timonense
Pathway
atim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CYJ17_0009165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atim02000
]
CYJ17_0009165
Transporters [BR:
atim02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CYJ17_0009165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_29
nSTAND1
AAA_22
AAA_16
NB-ARC
AAA_23
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WOS99970
LinkDB
All DBs
Position
complement(2187488..2189305)
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AA seq
605 aa
AA seq
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MRLGKRAATTHDKAASAATATLKADQPVVTPHPKTDKPVLGFGELDVKFATEFGAVHAVR
GVSIDVRPGEVVGLVGESGSGKSVTSTTALGLLPSNAVISGSVQVAGREVRGMTSRGMRA
LRGAEVGMVFQEPMTALNPVLTIGRQMTEGLETHGLAFGEDARNRAVAMLKAVGLPDAEE
RMNQYPHQLSGGQRQRVVIAIALIANPSVIIADEPTTALDVTVQADILDLLRSLKDQLNT
GILLITHSMGVIADMADRVHVMFKGEIVESGDVVQVLNHPKHPYTRRLLEAVPHLGQGRE
QFGFSLEKEASIDLNKKVLEAKDLVIEYEIPGKEPFRAVDHVSLDVAEREIVGLVGESGS
GKSTIGKCVLGLIPAASGEVKIFGEDLVGASRKHAQELRQHVGVVFQDPAASLDPRFPVG
DCIMEPLDVHKVGTKAERRQRVYDLLDAVRLPRSSFNRYPHELSGGQRQRVCIARALALR
PKLLIADEPTSALDVSVQAQVLTMLSELQDDMGFACLFISHDLAVVDMLSHRVVVLQNGK
VVEAGQREDVLHNPQEAYTQRLLAAAPVPEPIEQRRRREERHALLRKQGREVSRLRLNEN
DDAAN
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcggaaaacgcgctgcaacaacgcacgataaagctgcctccgcggccacggcc
acgctgaaggctgaccagcccgtcgtcaccccgcacccgaaaaccgataagccggtgctc
ggcttcggtgaactggacgtcaaattcgctaccgaattcggtgcggttcacgccgtgcgc
ggcgtgagtattgatgtgcgcccgggtgaagtggtgggcctggtgggcgaatccggttcc
ggcaagtccgttacctccaccacggccctcggcctgctcccttccaacgctgttattagc
ggaagtgtgcaggtggccgggcgggaagtgcgcgggatgacctcgcggggcatgcgcgcc
ctgcgcggcgccgaagtgggcatggtgttccaggaacccatgaccgccctcaacccggtg
cttaccattggccgccagatgacggaaggtctggaaacccacgggctcgccttcggggaa
gacgcccgtaatcgcgcggttgccatgctcaaggctgtcgggctgcccgatgccgaagag
cgcatgaaccagtacccgcaccagctttccggcgggcagcgccagcgcgtggtcatcgcg
attgcgctcatcgccaacccctccgtcattattgcggacgaaccgaccaccgccctggac
gtgacggtccaggccgatatcctcgacctgctgcgctccctcaaggaccagctgaatacc
ggcatcctcctcatcacccactccatgggtgttatcgcggatatggccgaccgggtccat
gtgatgttcaagggtgagattgtggaatcgggcgacgtcgttcaggttctgaaccacccc
aagcacccgtatacgcgccgtctgctggaagccgtgccgcatctgggccagggccgcgag
caattcggtttctccctggaaaaggaagcttctattgacctcaataagaaggtgctggaa
gctaaggatctcgttatcgaatacgagattcccggcaaggagcccttccgcgcggttgac
catgtgtccttggacgttgccgagcgtgaaatcgtgggcctcgtgggtgaatccggttcc
ggtaaatccaccatcggcaagtgcgtgctcgggctcatcccggcggcctccggtgaggtg
aagatcttcggtgaggacctcgtgggcgcttcgcgtaagcacgcccaggaactgcgccag
cacgtgggtgtggtcttccaggatccggccgcctcgctcgacccgcgtttcccggtgggc
gattgcattatggaaccgctcgatgttcataaggtcggcaccaaggcggaacgccgccag
cgggtgtacgacctgctcgatgcggtgcgcctgccgcgttcctccttcaaccgctacccg
catgagctttccggcgggcagcgccagcgcgtgtgcatcgcccgtgccctggccctgcgc
cccaagctcctcatcgcggatgaaccgacctccgcgctggacgtgtccgtccaggcccag
gttctcaccatgctctccgaacttcaggacgacatgggcttcgcctgtctcttcatttcg
cacgatctcgcggtggtcgatatgctctcgcaccgcgtggtggtgctgcaaaacggcaag
gtcgtggaagcgggccagcgcgaggatgttctccacaacccgcaggaagcctacactcag
cgcctcctggctgccgctccggttccggaaccgattgagcagcgccgccgccgcgaagaa
cgccacgcgctgctgcgtaagcagggccgtgaagtctcgcgtttgcgtttgaatgagaac
gacgacgccgccaactag
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