Acidaminococcus timonensis: ACFWTX_00385
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Entry
ACFWTX_00385 CDS
T11682
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
atio Acidaminococcus timonensis
Pathway
atio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACFWTX_00385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atio03019
]
ACFWTX_00385
03009 Ribosome biogenesis [BR:
atio03009
]
ACFWTX_00385
Enzymes [BR:
atio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACFWTX_00385
Messenger RNA biogenesis [BR:
atio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACFWTX_00385
Ribosome biogenesis [BR:
atio03009
]
Prokaryotic type
rRNA helicases
ACFWTX_00385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
Cas3-like_C_2
NAT10_TcmA_helicase
CMS1
Motif
Other DBs
NCBI-ProteinID:
XOQ49744
LinkDB
All DBs
Position
complement(84884..86518)
Genome browser
AA seq
544 aa
AA seq
DB search
MTEINKMENTTAESKPEITSFEDLNLDRKILAALKEMGFEEPSPIQKGAIPMALEGEDLI
GQAQTGTGKTAAFGIPIIQKINEKDRHIQALVMSPTRELCIQVADEISKIGKTKRIRVLP
VYGGQPIERQIRSLKRGIQVVIGTPGRLLDHIRRGTIDLEYVNFLVLDEADEMLDMGFVD
DMENIIKNVPPERQTMLFSATMPRPILSISKKYMRAPKVVAIHKEVVTAPTIDQYYYETR
DKVDGLCRILDTTDDCKMIIFCRTKKGVDELVIALATRGYEAEGLHGDLSQNQRDRVMKK
FRSGQVDILVATDVAARGLDIDNITHVVNFDVPSDSESYVHRIGRTGRAGNTGVALTFIT
PREFRQLKLIERSIKTKIIRGTLPTDASVLERQREQIVSRMQTILEQDRYQDYLPIVETL
EKDYDVQDIAAAALKFMQEGAKALEEPAEEESLPDALANTGAKPGMVRLFVNIGRSSRVT
VRDIVQSIAIEAEIPARSIGRISIYDKFSFVEVPMEHAEKVLAVMHRNTIRGCRVNMEPA
KVRV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaatcaataaaatggaaaatacaacggcggaatccaagccggaaatcacgtct
ttcgaagacctgaacctggaccggaagatcctggcagccctgaaggaaatgggctttgaa
gaaccgtcccccatccagaaaggcgccattcccatggccctggaaggggaggacctgatc
ggccaggcccagaccggtaccggcaagaccgcggctttcgggatccccatcatccagaag
atcaatgaaaaggaccggcacatccaggccctggtcatgagccccacccgggaactgtgc
atccaggtggcggacgaaatcagcaagatcggcaagaccaaacggatccgggtacttccg
gtgtacggcggccagcccatcgaacggcagatccgcagcctgaaacggggcatccaggtg
gtcatcgggactccgggccggctgctggaccatatccgccggggcaccatcgacctggaa
tacgtgaacttcctggtgctggatgaagccgatgaaatgctggatatgggctttgtggac
gatatggaaaacatcatcaagaacgttcccccggaacggcagaccatgctgttttccgcc
accatgccccggcccatcctgagcatcagcaagaaatacatgcgggctcccaaggtggtg
gccatccacaaggaagtggtgacggctcccaccatcgaccagtactactatgaaacccgg
gacaaagtggacggtctgtgccggatcctggacaccaccgacgactgcaagatgatcatc
ttctgccgcaccaaaaagggtgtggacgaactggtcatagccctggccacccggggctat
gaagcggaaggcctccatggggatctgagccagaaccagcgggaccgggtgatgaagaag
ttccgcagcggtcaggtggatatcctggtggctaccgatgtggcggccagaggcctggat
atcgacaacatcacccatgtggtgaacttcgatgtgcccagtgacagcgaaagctatgtg
caccggatcggccgtaccggccgtgccgggaacaccggtgtggccctgaccttcatcact
ccccgggaattccgtcagctgaaactgattgaacggagcatcaagaccaagatcatccgg
ggcaccctgcccaccgacgccagcgtactggaacggcagcgggaacagatcgtttccagg
atgcagaccatcctggaacaggatcggtaccaggattatctgcccattgtggaaaccctg
gaaaaggattatgatgtgcaggatatcgccgcggcagccctgaagttcatgcaggaaggg
gccaaggccctggaagaaccggcggaggaagaaagcctgccggatgccctggccaacacc
ggtgccaaaccggggatggtccgtctgttcgtgaacatcggccgttccagccgggtcacc
gtacgggatattgtccagagcattgccatcgaagcggaaatccctgcccggagcatcggc
cggatcagcatctacgacaaattcagctttgtggaagttcccatggaacatgcggaaaaa
gtcctggccgtgatgcaccggaacaccatccggggctgccgggtgaacatggaacctgcc
aaagtacgggtataa
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