Aerococcus tenax: DBT50_002720
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Entry
DBT50_002720 CDS
T09458
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
atj
Aerococcus tenax
Pathway
atj02020
Two-component system
atj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
atj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DBT50_002720 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DBT50_002720 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atj03021
]
DBT50_002720 (rpoN)
Transcription machinery [BR:
atj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DBT50_002720 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
Glycos_trans_3N
HTH_38
HTH_Crp_2
MarR_2
HTH_3
HTH_36
Motif
Other DBs
NCBI-ProteinID:
WIW73073
LinkDB
All DBs
Position
unnamed1:575825..577156
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AA seq
443 aa
AA seq
DB search
MAINYRTQQKIKEKLTPYVRNQLVHSTRLLQKNQVDLISELNNYYESNPFIEISENQQVQ
STFTHEANDYSLADTLADSHAVSLDEYLIQQINEKPIAAHEKRQVAYLIGQLDQDGYYRK
EDQATRQLFAWSQAELETYLSILQSLEPKGIGARNLQECLALQAKALPDGQLVEALINDH
LEDLAQGNFDKIAQQESIPLDQVRAGLIQIQSLEPRPARNFSHDIPAYTLPDIIVKTKNG
EVSFQVSKDYLPQISFKQDYYQAMTAKSPDEETLAYLRDKKREFDWLVFSLKKRDQLLLK
ISQYLVHYQAAYLNQQENQLRPLSQKELAQALNYDDSTISRAIMDKYLQYNQRILSFHDL
LAKKVSANGESLTRKQAETFIRQIIDQEYPHHPLSDQAISDHLALHNYYLARRTVAKYRQ
AMGIPGARRRKRQKLAQKNKDQA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggctatcaattatcgtacccagcaaaagatcaaagaaaaattaactccctatgtcaga
aaccaactggtccactccacccgactcttgcaaaagaaccaggtcgacttaatcagcgaa
ttgaacaactactatgaaagcaacccctttatcgagattagtgaaaatcaacaggtccaa
tccacctttactcatgaggcgaatgactattctttagcagatactttggctgattcccat
gctgtatccttggatgagtacctgattcagcaaatcaatgaaaaacctatagctgcccat
gaaaaaagacaagttgcttatttaattggccaactggatcaagacggttactaccgcaag
gaggaccaggccacccgccaactctttgcttggagtcaagctgaattagagacttattta
agtatcctgcaaagcctggaacccaaaggcatcggcgcccgtaatttacaagagtgtcta
gctttacaggccaaggcccttcctgatggacaattagtggaagctttaatcaatgatcac
ttagaagacctggcccagggaaactttgacaaaatcgctcagcaagaaagcatccctcta
gaccaggtaagggcgggcttgatacagattcaaagtctggaaccccggccggctcgtaat
ttttctcatgatatccctgcttacaccttgcccgatattattgtgaagacaaaaaatggg
gaagtaagctttcaagtttctaaggactacctcccccaaataagctttaagcaagattac
taccaagccatgacagcaaaaagccctgatgaggaaaccctggcctatctcagagacaaa
aagcgagaattcgactggctggtcttctcactcaagaaaagagaccaactgctcttgaaa
attagccaatacctagtccactaccaagccgcctatctaaatcagcaagaaaaccaactc
cgccccctgtcacaaaaagaactagcccaggcactgaattatgacgattcaaccatttcc
cgggccattatggataaatacttgcaatataatcagcggatcttgagtttccacgacctc
ctagctaaaaaagtttccgccaatggcgaatctctgactcgcaagcaagcagaaacattc
attcgccaaatcattgatcaggaatacccccaccatcccctcagcgaccaagccattagt
gatcacttagccctccacaactattacctcgcccgccggactgtggccaagtaccgccaa
gccatggggattcccggggcacgaaggagaaagcgacaaaaacttgcccagaaaaataaa
gatcaggcataa
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