Aerococcus tenax: DBT50_004200
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Entry
DBT50_004200 CDS
T09458
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
atj
Aerococcus tenax
Pathway
atj03410
Base excision repair
atj03430
Mismatch repair
atj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DBT50_004200 (recJ)
03430 Mismatch repair
DBT50_004200 (recJ)
03440 Homologous recombination
DBT50_004200 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atj03400
]
DBT50_004200 (recJ)
DNA repair and recombination proteins [BR:
atj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DBT50_004200 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DBT50_004200 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DBT50_004200 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WIW74250
LinkDB
All DBs
Position
complement(1066615..1068933)
Genome browser
AA seq
772 aa
AA seq
DB search
MLKANYEWQLRPSFDQLDLEKEQVIKETQLSPFLVDLLFQRGKQNSQEINDFLSEKPHFH
DPFLLHDMQKAIDRLEEAVRNNELILIYGDYDADGITATTILYELLESIGANVTYYLPDR
FVDGYGPNKEVYAYYIKQGVQLILTCDNGVAGHEAVKYAEDAGVNVIITDHHEIGNTLPD
AYAIVHPRHPEGNYPFDDLCGAGVAFKLAQAMTGGLPVEYLDVCAIGTIADLVRLEDENR
SIVQQGLKIMAHSERIGLMTLMKSQNIDLNHIDEETIAFNIAPRFNALGRLASAKPGVEL
LTSFDPDYCQELVNTIETTNQKRRAIVDQVSQQAIQIVEEWEELPEIIILSHSNWHEGVL
GIVASRLVERYQRPSIILNFNAEKAEYKGSGRSVAGINLFKLLQAAKEYAPKSGGHAMAA
GMTIAEDQFEAWKAAIYQAVEPFKEQLQGKIPLTIDAKITADQLTLENIQELNRLKPFGT
ANPKPIFLIENESISAPQQLGKDKNTLKFSLTKENQQLEVIGFQKGNLANYLQAGQSVDL
VVEASINTWQGKSRPQAILLDMASDQEIIVDWRREKNPDLIFSLPQSYYYFESKSLIAQY
KEQIPSQACLIGEEDLKQSREHYSQLVIFELPKNLQKLRDFVHNENIETIYLFSYSPISA
RKIGMPNRDQFALLYRYFIFYKELDLTEKKADLARYLKLPLPLLNLLLKVLVEAELLEQN
GQIYRIRPGQNKIDLKESTSLKNWAKQIEKENFLLNETIENLTRYFFQEDNL
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaggcaaattatgagtggcaattaaggccaagttttgatcaattggatttagaa
aaagagcaagtgattaaggaaactcaattgtcgccattccttgtcgatttactttttcag
agagggaaacaaaactctcaggaaattaatgattttttgagtgaaaagcctcattttcat
gatccctttctactccatgatatgcaaaaggccattgatcgtttagaagaagctgttaga
aataatgagcttatattaatctatggcgactatgatgccgatggaattacagcaaccacg
attctttatgaacttttagaatctataggggctaacgtaacgtattacttaccagaccgc
tttgtggatggctatggccccaataaggaagtgtatgcctactacattaagcaaggggtc
caattaattctaacctgtgataatggtgttgccggtcatgaggcagtgaaatatgccgaa
gatgctggcgttaatgtcattatcactgaccaccatgaaattggaaacactttacctgat
gcctatgctattgttcatcccagacaccctgaggggaattatccctttgatgatctatgt
ggagctggagtagcctttaagttagcccaagcgatgactggtggcttaccagttgaatat
ttggatgtctgtgctattggaacaatcgctgatctggtccgtttagaggatgaaaatcgc
agcattgttcagcaaggcttaaagattatggctcatagtgaaagaatcggtctaatgact
ttaatgaaaagtcaaaacattgatctaaaccatatcgatgaagaaactattgcctttaac
atagctccacgatttaatgccttaggtcgcttagcttcggctaaaccaggagttgaacta
ctcacgagtttcgacccagattattgtcaggaattagtaaataccattgaaacgaccaat
caaaaacgacgagcaattgttgaccaggttagtcagcaagcgattcagatagtcgaagag
tgggaagaattaccagaaattatcattttatctcattccaattggcatgagggggttcta
ggtattgtggctagtcgactggtagagcgctatcagcggcctagtatcattttaaatttt
aatgctgaaaaggcagaatataaggggtcaggtcgttcagttgcaggaatcaacctcttc
aagcttctccaagctgcaaaggaatatgcccctaagagtgggggacatgccatggcagct
ggtatgaccattgctgaagaccaatttgaagcttggaaagcggcaatctatcaggcagtt
gagcctttcaaagagcaattacaagggaagattcctttaacaattgacgccaagattact
gccgatcaattgaccttagaaaatattcaggagcttaatcgcttaaaaccatttggtaca
gctaatcccaaacctatatttttaattgaaaatgaatcgatctctgcgcctcagcaatta
ggaaaagataagaacaccttaaaattttctttgactaaggaaaatcaacagctagaagtt
atcggttttcagaagggaaatttggctaattatttacaggctggtcaaagtgttgatctg
gttgtcgaagcatccattaatacctggcagggaaaaagtcggccacaagctattttactc
gatatggctagcgaccaagaaataatcgttgactggcgaagagaaaaaaatcctgacctt
attttttcccttccccaaagttattattattttgaaagcaagtccttaatcgctcaatat
aaggagcagattcctagtcaagcttgtttaataggggaagaagacttgaagcagagcagg
gaacattatagccagttagttatttttgaactaccaaaaaatttgcaaaagctaagagac
ttcgttcataatgagaatatagaaacaatttatctattttcatatagtccgatatcagca
agaaaaattggtatgcccaatcgcgatcaatttgctctgctttatcgttatttcattttc
tataaagaacttgatttgaccgaaaaaaaggcagacttggctaggtatttaaagctaccg
cttcctcttcttaacttattgttaaaagttttagttgaagcagagcttttagaacaaaat
ggtcagatttatcgtattcgaccaggtcagaataagatcgatttaaaagagtcaaccagc
ctaaaaaattgggcaaagcaaattgaaaaagaaaactttcttttaaatgaaaccattgaa
aatttaactcggtattttttccaggaggataatttatga
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integrated database retrieval system
