Aerococcus tenax: DBT50_005980
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Entry
DBT50_005980 CDS
T09458
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
atj
Aerococcus tenax
Brite
KEGG Orthology (KO) [BR:
atj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atj03019
]
DBT50_005980
Messenger RNA biogenesis [BR:
atj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DBT50_005980
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
WIW74579
LinkDB
All DBs
Position
complement(1474761..1475726)
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AA seq
321 aa
AA seq
DB search
MDKCLIYEIPQNEKFDLYILIKNANVRTDRNGRDFIAFTFQDKSGTIDGMYWSAMEDEVE
AFQSGRVVRLKGHRELYNGQPQVKISGLRLAHDGEPNDPTLFIADGPMKVEDMKAEIEAG
IKSIMHPVLKKIVGSIMTEYDDIFYQYPAAKRHHHAFVGGLAFHTVSMLRLAQAIAKLYP
NVDKSLLYAGVILHDAAKVIEFVDPLSGDYSIEGNLIGHISLMGQKISLTAEQLGYRQDE
EAVVLLKHMILAHHGKNEFGSPVTPRLLEAEILHRVDDLDAKINMMTSHLKDVEPGEFTP
KIMGLEGRSFYHPSDDYYQNI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggataagtgcttaatttatgaaattcctcaaaatgaaaaatttgatctctatattttg
ataaaaaatgccaatgtgcgtactgaccgcaatgggcgcgacttcattgcctttactttc
caagataagtcggggactattgatggtatgtattggagtgccatggaagatgaagtggag
gcctttcaaagtggtcgggtggtccgcttaaagggacaccgggaattatataatggccaa
ccccaagtcaagatttcgggcttgcgtctagcccatgatggtgaacccaatgatccgacc
ttgtttattgccgacggaccgatgaaggtagaagatatgaaggctgaaattgaagcgggt
attaaaagcattatgcatccggtgctcaagaaaattgtgggcagcatcatgaccgaatac
gatgatattttctaccaatatccagctgccaaacgccaccaccatgcctttgttggagga
ttagccttccacaccgtttccatgttacgcctggctcaagcgattgctaaactttaccct
aatgtagataaaagcttgctttatgctggggttatcctccatgatgccgctaaggtgatt
gaatttgtagatcctttaagtggggactattcgattgaggggaaccttattggccatatc
tctttgatggggcaaaaaatttccctcaccgcagaacagctaggctaccgccaagatgaa
gaagcagtagttttacttaaacatatgattcttgctcaccacgggaagaatgaattcggt
agtccggtaacccctcgcctattggaagctgaaatccttcatcgggtggatgacctggat
gcaaagattaatatgatgaccagtcacttaaaggatgttgagcctggtgaatttactcca
aaaattatgggcttagaaggacgttctttctaccatccgagtgatgactattatcaaaat
atttaa
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