Aerococcus tenax: DBT50_008650
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Entry
DBT50_008650 CDS
T09458
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
atj
Aerococcus tenax
Brite
KEGG Orthology (KO) [BR:
atj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atj03019
]
DBT50_008650
03009 Ribosome biogenesis [BR:
atj03009
]
DBT50_008650
Enzymes [BR:
atj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DBT50_008650
Messenger RNA biogenesis [BR:
atj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DBT50_008650
Ribosome biogenesis [BR:
atj03009
]
Prokaryotic type
rRNA helicases
DBT50_008650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
PhoH
Cas3-like_C_2
DUF2811
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WIW73796
LinkDB
All DBs
Position
560331..561680
Genome browser
AA seq
449 aa
AA seq
DB search
MSFKEYHFQPFIEAALEKLAFKEPTPIQKKVIPVIQAGKSLVAQSQTGSGKSHAFLLPLI
DQLKPENYTQLVITAPSRELADQLYQTAQQLVGDSDFDFHIERAYGGTDTKRQKERLENQ
DPQVVIGTPGRLLDLVTEGSINVHKVEHFVVDEADMTLDMGFLHTVDQIASRMPDDLKIY
VFSATIPEKLHPFLRKYLEHPEWIQVANEKLISPTITNILLPLRGRSKDDLLKQALTMGA
PYLVLIFANTIEEVDQLYLKLKQWGLSVAKLHGDLDSRERRRVMRQIQHLDYQYVVATDL
AARGIDIEGVSHVVNYDIPKELEFFIHRVGRTGRQGMKGIALTFYHPDQEKAIRWLEDRG
IHFEVKDIKNGQWVEVKDHKERQLRKDRHQEETDHVVKGMINRNKKRKVKPGYKKKLDRQ
IKAYKRDKYNKKQRQAARQKRKQNKENNR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagaataccatttccagccttttattgaggcggccttagagaaattagcc
tttaaagaacctaccccgattcaaaagaaagttattcccgttattcaagcgggaaaaagc
ctagttgcccaaagtcaaaccggatcaggaaagtcccatgctttcttgctccccttaatc
gaccaattaaagcctgagaattatacccaattagttatcacggcacccagtcgggaattg
gctgaccaattgtatcaaactgcccaacagcttgtgggggatagtgactttgattttcat
attgaaagagcctatgggggaacagacaccaagcggcaaaaagaacgcctagaaaatcaa
gatccccaagtggtaattgggactccgggtcgcttattagacttagtgactgaaggctcg
atcaatgtccataaagtagaacactttgttgtggatgaggcggatatgactttggatatg
ggctttttgcatacggttgaccaaatcgccagtcggatgcccgatgatttgaagatttac
gtcttttctgccaccattccggagaaattacatcccttccttagaaagtacttggaacat
ccagaatggatccaagttgctaacgaaaagctgatttcgccaaccattaccaatatctta
ctccccttaagagggcggtccaaagatgacctgctcaagcaagccttaaccatgggggca
ccctatttggtccttatttttgcaaataccatcgaggaagtggaccaactctatttaaaa
ctcaagcaatgggggctatcggtagctaagttgcacggcgatctcgacagtcgtgaacgc
cggcgggtgatgcgtcaaatccaacaccttgattatcaatatgtggtggctacggatcta
gctgcccgcgggattgacattgaaggggtctcccatgtggttaactatgatattcctaaa
gagttagaattctttatccaccgggtaggccgtacgggacggcaaggaatgaagggcatt
gccttgaccttctaccatcctgaccaagaaaaggcgattcgctggttagaagatcgtggg
atccactttgaggtgaaagacattaaaaatggtcaatgggtcgaagtcaaagaccataag
gaacggcagttaagaaaagaccgccaccaagaggaaacggaccacgttgttaagggtatg
attaaccgtaataagaaaaggaaagttaaacccggttataagaaaaaactcgaccggcaa
attaaagcatataaacgagacaaatataataaaaaacaaagacaagctgctcggcaaaaa
cgcaagcaaaataaagaaaacaaccgttaa
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