Aerococcus tenax: DBT50_008760
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Entry
DBT50_008760 CDS
T09458
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
atj
Aerococcus tenax
Pathway
atj03030
DNA replication
atj03410
Base excision repair
atj03420
Nucleotide excision repair
atj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DBT50_008760 (polA)
03410 Base excision repair
DBT50_008760 (polA)
03420 Nucleotide excision repair
DBT50_008760 (polA)
03440 Homologous recombination
DBT50_008760 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atj03032
]
DBT50_008760 (polA)
03400 DNA repair and recombination proteins [BR:
atj03400
]
DBT50_008760 (polA)
Enzymes [BR:
atj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DBT50_008760 (polA)
DNA replication proteins [BR:
atj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DBT50_008760 (polA)
DNA repair and recombination proteins [BR:
atj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DBT50_008760 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DBT50_008760 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WIW73815
LinkDB
All DBs
Position
586198..588864
Genome browser
AA seq
888 aa
AA seq
DB search
MSKQEKLLLFDGSSLAFRAFFAMHDLNRFKNNKGLHTNALYAFHLMLTHVLEKEKPSHAL
VAWDAGKTTFRTAYYPEYKGGRDKTPQEFVEQMPYFNKLLDAFGIAHYELANYEADDIIG
TLSQRGAEAGMDVVIISGDKDLIQLARDQVRVDINRKGVTNIDSYTPQSIQADQGISPEQ
HIDVKGLMGDNSDNYPGVTGIGEKTALKLIQEFGSMEEVYANIDQVSGKKRKENLVKDKD
QAFLSKKLARIILDAPVEKSLADLKCQGIQAQDLVNFYREMNFKQFMEKFLANSGADADF
ELEDSSWKVPDYQVLDQLEAKHFTQDQTALYLEMFENNYHEGELIYVVWGNKDHIYLASP
DLVRESQAFKNWIEDPHAKKVLYDAKRSQVILKGLGMDLAGVSDDVLIASYLIHARDLSG
DVANVAREFNLDYLAYDSEVYGKGKKVAVPEDKTRLYDHLVAKVSVINDLLPIIKDRLEA
DEMVELYRKIELPLAQVLAKMEIMGISVDRSRLVGLSQSYEEQLDQLQEEIYREAGVEFN
INSTQQLSKILFEDMGLKGGKKTKSGNYSTAQSELEKLQGVPIIDLILAYRQLAKLQSTY
VQGILDYIHQDGKVHSRFIQTLTTTGRLSSADPNLQNIPIRTEEGRKIRQAFVPSHPDWV
IFSSDYSQIELRVLAHVSGDPHLQEAFKENKDIHTATAAKVFHKDEKNISKDERRQAKAV
NFGIVYGISDYGLSQNLSISRQEAKAFIDKYFEIYPKVAEYMDKSVEIAREAGYAKTLFN
RRRYLPDLKAKNYNVRSFAERTAMNSPIQGTAADIIKVAMVEMDQALKEHQLQANLLLQV
HDELIFEVAKEDLEDLAALVKDVMENAVSLDVPLIVDSNYGSTWYDAK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaagcaagaaaaattattgctattcgatggctcatcattagcctttcgggctttc
tttgccatgcatgatttaaatcgttttaaaaataataaaggcctacataccaatgcccta
tatgcttttcacttgatgttgacccacgtcttagaaaaagaaaagcctagccatgccctg
gtggcttgggatgctggtaagaccacctttcggacggcatattatcctgaatacaagggg
ggcagggataaaacgccgcaagaatttgtagaacagatgccttattttaataaattgctg
gatgcatttggtattgcccactatgaattagcaaattatgaagcggatgatatcattggt
accctgtcccaaagaggcgcagaggctggtatggatgtagtgattatctccggcgataag
gacttgattcaactggctagggaccaggttagggtagatattaaccgtaagggagtgact
aatattgattcctatactcctcaatccatccaagcagaccaaggaatcagccctgaacaa
cacattgatgttaaggggttgatgggcgataattccgataattatcctggtgtgactgga
attggggagaagaccgccttgaaactaatccaggaatttggttccatggaagaggtctat
gctaatatcgatcaagtctccgggaaaaaacgtaaggaaaacttagtcaaggataaggat
caagcctttttatccaaaaaattagcccgaattattcttgatgctccagttgaaaaatcc
ctggcagacttaaaatgccaaggcattcaggctcaagatttggttaacttttatcgtgag
atgaacttcaagcaatttatggaaaaattcttagctaactctggggctgacgctgacttt
gaattagaggattccagctggaaagtccctgattatcaagtccttgaccaacttgaagct
aagcatttcacccaagaccaaacagccctctacctagaaatgttcgaaaataattaccat
gaaggggagttaatctacgttgtttgggggaataaggatcatatctacttggcctcacca
gacctggtgagggaaagccaagcatttaaaaattggatagaagatccccatgctaaaaag
gtcctctatgatgctaagcgaagccaagtgatcttaaaaggcttggggatggacttagcg
ggggttagtgatgatgtccttatcgcttcctatctcatccatgcccgtgatttaagtggc
gatgtggctaatgtggcccgagaattcaatttggattatctagcctatgatagtgaagtc
tatgggaaaggcaagaaagtggcggttcctgaagataaaacccgcctttatgaccacctg
gtagctaaggtatctgttattaatgacctactacctattattaaagatcgcctagaagcg
gatgagatggtcgaactttaccgaaaaattgaactccctctagcccaagttctagctaaa
atggaaattatggggatttccgttgaccgcagcaggctggtaggtttatcccagtcttat
gaagagcaacttgaccagctgcaagaagaaatctaccgagaagccggggttgaatttaat
attaattccacccaacagctgagcaagattctctttgaagatatgggactaaagggtggc
aagaaaaccaagtctggtaactattcaacggcccaatctgaattggaaaaattacaaggg
gtgcccatcattgatttgatcctagcctatcgccaattagctaagcttcaatccacttat
gttcaagggatcctcgattatatccatcaagatggcaaggtacacagtcgtttcattcaa
accctaaccactaccgggcgcttaagttcagctgatccgaacttacaaaatattcctatc
cgtaccgaagaagggcgtaaaattcgccaagcctttgtgccttctcatccggactgggtc
attttctcatcggactattcgcaaattgaattacgtgtccttgcccatgtttctggtgac
cctcatcttcaagaagcctttaaagaaaataaggatatccacaccgctacagcggccaaa
gtcttccataaagatgaaaagaacattagtaaggatgaaagacgtcaagccaaggcagtc
aattttggaattgtttacgggattagtgactatggtctcagtcaaaacctttcgatttct
cgtcaagaggccaaggcctttattgataaatattttgaaatttatcctaaagtggctgaa
tatatggataaaagtgtggaaatcgcccgtgaggccggttacgctaaaaccctctttaac
cgccgtcgctaccttcctgacttaaaggctaaaaattataatgttaggtcctttgccgaa
agaaccgcaatgaattcgccaattcaagggacggcagccgatattattaaggtagccatg
gttgagatggatcaagccttaaaggaacatcaacttcaggcaaatctcctcctccaagtc
cacgatgagttaatttttgaagtagccaaagaggacttagaagacttagctgccttagtt
aaagacgtcatggaaaatgcagtttccttagacgtcccattaattgttgatagtaactat
gggtccacttggtatgatgccaagtaa
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