Aureibacter tunicatorum: AUTU_01520
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Entry
AUTU_01520 CDS
T09744
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
atk
Aureibacter tunicatorum
Pathway
atk03030
DNA replication
atk03430
Mismatch repair
atk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AUTU_01520 (dnaE)
03430 Mismatch repair
AUTU_01520 (dnaE)
03440 Homologous recombination
AUTU_01520 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atk03032
]
AUTU_01520 (dnaE)
03400 DNA repair and recombination proteins [BR:
atk03400
]
AUTU_01520 (dnaE)
Enzymes [BR:
atk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AUTU_01520 (dnaE)
DNA replication proteins [BR:
atk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AUTU_01520 (dnaE)
DNA repair and recombination proteins [BR:
atk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AUTU_01520 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
DUF1433
DUF655
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
BDD02669
LinkDB
All DBs
Position
complement(194557..198867)
Genome browser
AA seq
1436 aa
AA seq
DB search
MYLVYDTETTGLPKNFSAPITDHENWPRLVQLAWQIHDEKGDLVEVKNFIVKPDGFTIPF
NAEKIHGISTKRAMKQGMPLDYVLEEFSKAVEKSKFVVGHNIGFDVNIMGAEYDRREWDT
GLIMDMPVIDTKDEATDYCAIPGGRGGKFKWPTLTELHTKLFGEAFAEAHNASADVEATA
RCFLELIRIDVIGHERLGTTEDVIKVFKDNNPKTIELIGLNIEPYTPDNVEFAEEDSDSG
ITSQASDIDLTDIPYSHLHVHSQYSVLQATCQIGGIVNKAKEDGMPAVALTDHGNMMAAF
HFVRDALKAEIKPILGCEYYVAEDYKKRQFTKDNPDRRFNQVLIAKHKEGYHNLAKMSSL
AYIDGLYAGYPRIDKELIKEYKEGLMAFTGSLNGEIPNLILNVGEEKAEEAFKWWHEQFG
DDFYVELIRHGLPEEDHVNEVLFGFAQKYGVKYFASNNVYYENQDGSNAHDILLCVKDGE
KQSTPIGKGRGFRYGFPNDQFYFKSQADMKELFKDLPEAIVTTNEIVEKCESYKLAREVL
LPAFDIPEQFIDPKDEEDGGKRGENAFLKHLTFEGAKKRYDEITPEIKERLDFELMIIEK
TGYPGYFLIVQDFTSAAREMGVSVGPGRGSAAGSAVAYCIGITNVDPIAYDLLFERFLNP
DRVSLPDIDIDFDDEGRQRIINWVVDKYGFNQVSHIITYGTMAAKSSIRDTARVLDLPLP
DADRIAKLVPDMKLKKLFGMDDRQLSDKLNSEQMDMAHQLKSIAAQPNLEGEVVSTARVL
EGSVRNTGIHACGVIITPDDIRKFIPVSTAKDADLLVTQFDNSVVEDAGMLKMDFLGLKT
LSIIKDAIRIVKERHSVEIDPDEIPLDDSKTYELYQRGETNGTFQFESPGMQKHLKALKP
DKFGDLIAMNALYRPGPLEYIPNFIARKHGQEPIIYDLGDMEEYLAETYGITVYQEQVML
LSQKLAGFTKGEADMLRKAMGKKIFALLEKLKPKFIDGGKERGHDEQRLNKIWKDWEAFA
AYAFNKSHSTCYSVVAFHTGYLKANYPAEYMASVLTHNMNDIKKVTFFMEECQRMGIPVL
GPDVNESQLDFTVNNNGEIRFGLGAIKGVGEGAVEVIIKERSNKGSFNSIFDLTKRIDLR
SANKKTLENLALAGAFDSFQNIHRAQFFAQDQKGLSLLEKSIKFGASHQESENSVQTSLF
GGDSGVQMPEPEIPTCEEWSTMDKLNKEKEVVGIYISGHPLDDYRLELENFCNQGIADLS
KDNPESLIGKEITIGGCVSQIGHRFTKKGQPFGTLTVEDYSGSFTFFLFSEDYVRFKQYM
VEGWFLFIKGKMQRQRWDETRIDFKISQIELLSDVKDKYCKGFKISVNVQELDEGIAEFM
TEIPQKHPGSIPYHIELIDRGNQIQVDTMSRNYTVNPDSKLLEELKQYPELKCKLI
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgtatttagtttacgataccgagaccaccggacttccgaagaacttttccgcgccaatc
accgaccatgaaaactggccaaggctagtccagttggcttggcaaattcatgatgaaaaa
ggcgacttggtggaagtcaagaatttcatcgtaaaacccgacggctttaccattccattt
aatgctgaaaagatccatggtatttctaccaaaagagcaatgaagcaaggtatgcctctt
gattatgtattggaagaattttccaaggccgtggaaaaatcaaaattcgttgttggacac
aatattggctttgacgtcaatatcatgggagcagaatacgacagacgtgaatgggatacc
ggcctgatcatggacatgcctgtcattgataccaaagatgaagccaccgactactgcgcc
atccctgggggtcgtggtggcaaattcaaatggcctacgctgacggaactgcatacgaaa
ctatttggcgaagcattcgcagaagcccataatgcctctgccgatgttgaagccacggca
aggtgttttctggaattaatcagaatagatgtcataggccatgaaaggcttggcaccaca
gaagacgttatcaaggtatttaaggataataaccccaagaccattgagcttatagggctg
aatatcgagccttacacccctgataatgtcgaattcgcagaagaggacagcgattctgga
attaccagtcaagcttcagacattgatctgacagatattccttattcgcacttgcatgtg
cattctcaatattcggtattgcaagcaacttgtcaaataggaggaatcgtcaacaaagcc
aaagaagacggcatgcctgccgtggcgttaacggaccatggaaatatgatggcggccttt
cactttgttagggacgcactcaaggctgaaatcaaaccgatattaggctgtgaatattat
gtggccgaagattataaaaaaagacaattcaccaaagacaatccggatcgcagattcaat
caagtgctaatagccaagcacaaagaaggctatcataacttggcaaaaatgagctctctg
gcttatatcgatggattatacgctggttatcctcgaattgataaagaacttataaaagaa
tacaaagaaggcttaatggctttcacgggaagcctaaatggtgaaattccaaatcttata
cttaatgtcggcgaagaaaaagccgaagaagcatttaaatggtggcatgaacaatttgga
gatgacttctatgtagaattaattcgccatggactgcctgaagaagatcacgtcaacgaa
gtattatttggcttcgcacaaaaatacggtgtcaaatacttcgcttccaacaatgtctat
tatgagaatcaagacggatcgaacgctcacgatattttgctatgcgtgaaagatggagag
aagcaatcaacaccgatagggaagggaagaggcttcagatacggatttcctaacgatcaa
ttctacttcaagagtcaagctgatatgaaagagcttttcaaagatcttcctgaagctatc
gtcactaccaatgaaatcgtcgaaaaatgcgaatcatataagctcgctagagaagtcctt
cttcctgcctttgacattccagaacaattcatcgaccccaaagatgaggaagacggtggc
aaaagaggtgaaaatgcctttctaaagcatttgacgtttgaaggagcaaagaaaaggtat
gatgagattacccctgagataaaagaaaggctcgactttgagttgatgattatagagaag
actggatatccgggatactttctaatcgtacaggattttacttctgccgctcgagaaatg
ggtgtttcagttggtccgggaaggggatctgccgcaggttccgctgtggcatactgcatc
ggaattacaaatgttgaccctattgcttacgacctgctatttgagcgtttcctaaaccct
gacagagtatcgcttcccgatattgatattgactttgatgatgaaggaagacagagaatc
atcaattgggtagttgacaaatatggctttaaccaagtatcgcatatcatcacctatggt
acaatggctgcaaaatcatccataagagatactgcaagagtacttgaccttcctcttcct
gatgctgaccgaatagccaagctagttcctgacatgaagctgaaaaagctctttggcatg
gatgacagacaactttctgacaagctcaattccgagcagatggatatggctcatcaacta
aaaagcattgccgcgcaacctaatctggaaggagaagtagttagcacagccagagtattg
gaaggttcagtgaggaatactggtatccatgcctgcggagtaatcattactccggatgat
atacgtaaattcattcctgtatccactgccaaggacgctgaccttcttgttacacagttt
gacaactctgtagtggaagatgctggaatgctgaagatggactttttaggcctaaagaca
ctaagtatcattaaagatgccatcaggatcgtcaaggaaaggcatagcgtggaaatagat
ccagatgaaattcctcttgatgatagcaagacatacgaactttaccaaagaggagagacc
aacggtacattccagtttgagtctccgggaatgcagaagcaccttaaagctttgaagccc
gataaattcggcgaccttattgccatgaacgccttgtaccgtccagggccattggagtat
attccaaactttatcgcccgtaaacatggacaagagcctatcatctatgatttgggtgac
atggaggaataccttgccgaaacttacggtattacagtttaccaagagcaggtgatgctt
ctgtctcaaaagctcgcaggattcaccaaaggtgaagccgatatgcttcgtaaagcgatg
ggtaaaaagatatttgctttgctggaaaaactcaagcctaagttcatcgacggaggaaaa
gaaagaggccatgacgagcaaagattgaataaaatatggaaagactgggaagcgtttgcg
gcttacgctttcaacaaatcccactcaacatgttactctgtagttgctttccataccgga
tacctgaaagccaattatccggcagaatatatggcttcggtgctaacgcataatatgaat
gacatcaaaaaggttactttctttatggaagaatgccaaagaatgggaattcctgtattg
gggccagatgtcaacgaatcccaattggactttacggtaaataataatggagaaattcgt
ttcggccttggtgcaatcaaaggtgttggagaaggggctgtagaagtaatcatcaaggaa
agaagcaataaaggctcattcaactctattttcgaccttactaaaagaatcgatttaagg
tctgccaataaaaaaacgttggaaaacctcgcactggccggagctttcgattcttttcag
aatattcatagagcccaattttttgcccaagatcaaaaaggattaagcttgctcgaaaag
tcgataaagtttggcgcttcccatcaagaaagcgagaactcggttcagacatctcttttt
ggcggtgattcaggcgtgcaaatgcctgagcctgagattccaacttgcgaagagtggagc
actatggacaagcttaataaagaaaaagaagttgtcggtatttatatctccggtcaccct
ctggatgattacaggctagagcttgaaaacttttgcaatcaaggcattgcggacctgagc
aaagacaaccctgagagcttgatcggcaaagagatcactatcggtggttgcgtaagccaa
attggacatagatttaccaaaaaaggccaaccatttggaacgctaacagtagaggattat
tcaggctcattcacattcttccttttttctgaggattatgtgcgcttcaagcaatacatg
gtcgaaggctggttcttgttcatcaaaggcaaaatgcaacgacaaagatgggatgaaacc
agaattgacttcaaaatcagtcaaatcgaattgctaagcgatgttaaagataaatattgc
aaagggttcaaaatctctgtcaatgttcaagaacttgacgaaggtatcgctgaattcatg
actgaaatcccgcagaagcaccccggatcgattccttaccatatagaactaatcgataga
ggaaatcaaatccaagttgacacgatgtcaagaaactatacggtaaatcctgatagtaaa
cttctggaagaactcaagcaatatccagaattgaaatgcaagcttatttag
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integrated database retrieval system
