KEGG   Aureibacter tunicatorum: AUTU_09380
Entry
AUTU_09380        CDS       T09744                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
atk  Aureibacter tunicatorum
Pathway
atk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:atk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AUTU_09380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atk03019]
    AUTU_09380
Enzymes [BR:atk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AUTU_09380
Messenger RNA biogenesis [BR:atk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AUTU_09380
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: BDD03455
LinkDB
Position
1120025..1121269
AA seq 414 aa
MKFENYYIAPEIKKTLALKGFRRPTDIQFKSIPPILKGEDVLAIAQTGTGKTAAFAIPIL
HKLHENKTRQRREDGIKCVVMVPTRELALQITEVFKELGAYTNLNILCVHGGVEQDSQIK
RLEKGVDIMIATPGRMFDLVSQKVIRLNRVDILVLDEADHMLDLGFIKDIRDLIKFLPKK
RQTLFFSATIDQKIKDLAYSLVFKPVRIQISPKDPVSKNVNHSVMFVEMDDKRFFLERLV
KENPESKILVFVRTKVRAERVSKAMERVGIKSMTMHGGKEQSDRLDVLGQFKVGKVKLLI
ATDVSARGIDIPNVDYVVNYDLPDKDENYVHRVGRTGRGKEKGNAVSFCSSEEKEMLDQI
EVYLGKKIQVLDVEKQDYQETLDFTEDHTNDWKGVMKEIQSLEGFSKKKKNKKK
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgaaatttgaaaattactatatagctccggaaataaagaaaactcttgcattgaaaggc
tttaggagacctactgatatccagttcaagtctattcctcccattttgaaaggagaggat
gtgttagccattgctcagacaggaactgggaaaacagctgctttcgctattcctattttg
cataagcttcatgaaaacaaaacacgtcaaagaagagaggacggcatcaaatgtgtcgtt
atggttcctacaagagagttggcacttcagataaccgaggtttttaaggaattaggagct
tatactaatctcaatattctttgcgtacacggcggtgtagagcaagacagtcaaataaaa
agattggagaagggcgttgatattatgattgcgactcccggaagaatgtttgatcttgtg
agtcagaaagttataaggcttaatcgagtggatatattggtgcttgacgaggctgatcat
atgttggatttgggctttatcaaggatattcgagatttgataaaatttcttcccaagaaa
cgtcaaacgctttttttctcagcaactattgatcagaaaatcaaggatttggcttattcg
ctagtattcaagcccgttagaattcaaatttctcccaaagaccccgtttctaaaaatgtt
aatcactctgtgatgtttgttgaaatggatgacaaacgttttttcttggaacgtttggtt
aaggaaaatcctgagagcaaaattctggtttttgtgagaacaaaagtacgagcagagcga
gttagcaaagccatggagagggttggaatcaagagtatgacaatgcacggaggcaaggaa
caatccgatagacttgatgtgcttggtcagtttaaggttgggaaggtaaaattgcttatt
gctactgatgtaagtgctagagggattgatattccaaatgtggactacgttgttaattat
gatttgccagataaggatgaaaattatgtgcatagagttgggcgtacaggacgtgggaaa
gaaaagggaaatgcagtgtctttttgcagcagcgaagagaaagagatgttagatcaaata
gaggtttacttgggcaaaaagattcaagttttggatgtggaaaaacaggattatcaagag
actttggattttacagaagaccacactaacgactggaaaggtgtgatgaaagaaatccag
tcattggaaggcttttcgaagaaaaagaaaaataagaaaaaataa

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