Aureibacter tunicatorum: AUTU_11850
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Entry
AUTU_11850 CDS
T09744
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
atk
Aureibacter tunicatorum
Pathway
atk03420
Nucleotide excision repair
atk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AUTU_11850 (uvrD)
03430 Mismatch repair
AUTU_11850 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atk03400
]
AUTU_11850 (uvrD)
Enzymes [BR:
atk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUTU_11850 (uvrD)
DNA repair and recombination proteins [BR:
atk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AUTU_11850 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AUTU_11850 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
DUF3553
AAA_12
AAA_11
DUF5604
Motif
Other DBs
NCBI-ProteinID:
BDD03702
LinkDB
All DBs
Position
1439789..1442047
Genome browser
AA seq
752 aa
AA seq
DB search
MSAEYLNGLNEPQLEGVVNTEGPTMIIAGAGSGKTKVLTSRIAYLINEQGVDPFNILALT
FTNKAAKEMKDRIEAAIGTEARSLWMGTFHSIFAKILRFEAEKLGYTRDFTIYDTDDSKQ
LIKQIVKELGLDDKIYKPNVVLNRISGAKNRLISWQEYIQNPLFKADDEQAAKPKLGEIY
KLYAQRCFKAGAMDFDDLLFNTNVLFKKHTDVLNKYQHRFKYVLVDEFQDTNISQYLITK
KLSAVSQNLCVVGDDAQSIYAFRGANIDNILNLERDFPELKTIKLEQNYRSTKTIVNAAN
DVIKNNKSQIPKVVWTANTQGELIEVIRATSDTEEGKIVAQAIFEEKVRKQLHNQDFAVL
YRTNSQSRAIEEALRRNNIKYKIVGGLSFYQRKEIKDLLAYFRVVINGNDEQSLRRIINQ
PKRSIGQTTVDKILVYSSENDLPLWEAVERHPLYLRGRASNAVGDFANMIKSFRIDAERN
DAFEVAKRIAKDSGLLKHLYDDKSIEGLSRFENVQELINAVKEFIDNEENEDKSLTAFLQ
EVALLTGVDQDKDDDPDKVTLMTIHMAKGLEFKHVFLVGMEEELFPSQMMLNSREDLEEE
RRLFYVAITRAEQKLTLSYALSRYRFGRLIECEPSRFIKEIKPEYLALSNKKAKKTTTTT
EPSTKFVNNLMNKGFKPSQATNKAKAVHNNPNFAPSDTSGLAEGQRVEHPKFGMGTVLNI
DASGSSKKATIKFDQVGEKTLLLSFAKLQIHD
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagaatatttgaatggcttgaatgagccacagctcgaaggtgttgtgaatact
gaggggccaactatgatcatcgccggagcgggttccggtaagaccaaagtgttgacttca
agaatagcttatttaatcaatgaacagggggtcgatccttttaacattctggctttgacc
tttacaaacaaggctgctaaagaaatgaaggataggattgaggcagctataggtactgaa
gcgagaagtctttggatggggacattccattcaatttttgcgaaaatattgaggtttgaa
gcggaaaagctgggttatacccgcgattttacgatatatgacaccgatgactccaagcag
ctgattaagcaaattgtgaaagaattaggtttggatgataagatttacaaaccaaatgtt
gttcttaacagaatttcgggagcgaaaaataggttgatttcttggcaagaatatatacag
aatccattgtttaaggctgatgatgaacaagcagccaagcctaagctgggggaaatatat
aaattgtatgctcagcgatgctttaaagcgggagcgatggattttgacgatttattgttc
aatactaatgtcttgtttaaaaagcacacggatgtcttgaataaatatcagcatagattt
aagtatgttttagtagacgagttccaagataccaatatatcccagtaccttattacgaag
aagctttccgctgtcagccagaatttgtgcgttgtgggagatgatgctcaaagtatttac
gcatttcgcggggccaatattgacaatattttgaatttggaaagggattttcccgaattg
aaaaccataaagcttgagcaaaattatagatccaccaagacgattgtaaatgctgccaat
gatgtgattaaaaacaacaaatcgcaaatacctaaagtggtttggacagctaatactcaa
ggcgagttgatcgaggtgataagagcgacttcggatactgaagaaggaaaaatcgtcgct
caggcaatttttgaagaaaaagttcgcaagcagctgcacaatcaagattttgcggtgctg
tacagaaccaatagtcaatccagagctatagaggaagctttgagacgtaataatatcaag
tataagattgtcggaggactttcattttatcaaagaaaagaaatcaaggacttgttggca
tattttagagtggtaatcaatggcaatgacgagcaatcgttgcgaaggattatcaatcag
ccaaaaaggtctattgggcaaactactgtcgataaaatattggtttattcttccgagaat
gatttgccgctgtgggaagcggttgaaaggcatccattgtacttgagaggaagagcttcc
aatgcggttggtgactttgcgaatatgattaaaagcttcagaatagatgcggaaagaaat
gacgcgtttgaagtcgctaaaagaatagcaaaagactcaggcttgttgaagcatctctat
gatgacaagtcgattgaaggcttgagtcgtttcgaaaatgttcaggaattaatcaatgcg
gttaaagaattcatagataatgaagagaatgaagacaaatcattgacggcatttcttcag
gaggtagcattgttgaccggagtggatcaggataaggatgatgatccggataaggtaact
ttgatgactattcacatggcgaagggacttgagttcaaacacgtgtttctagtggggatg
gaagaggagttgtttccttcgcaaatgatgctgaacagcagagaagatttggaagaggaa
agacgattgttttatgttgcaatcacaagagcggaacagaaattgactttatcatatgcg
ttgagcaggtataggtttggaagattgatagaatgcgagccaagcaggtttatcaaggaa
ataaagcctgaataccttgcattgagcaataaaaaagcgaaaaaaacaacgactacaaca
gagccttccacgaagtttgtcaataatttgatgaacaaaggtttcaaaccttctcaggct
acaaataaagccaaagctgttcataacaaccctaattttgctccaagtgacacaagcggt
ttagcggaagggcaaagggttgagcatcctaagtttggcatgggaactgttcttaatatc
gatgccagcggttcatctaagaaagcgacaataaaatttgaccaagtaggggagaagaca
ttattgctaagttttgccaaacttcagatacatgattag
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