Aureibacter tunicatorum: AUTU_35750
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Entry
AUTU_35750 CDS
T09744
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
atk
Aureibacter tunicatorum
Brite
KEGG Orthology (KO) [BR:
atk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atk03019
]
AUTU_35750 (cafA)
03009 Ribosome biogenesis [BR:
atk03009
]
AUTU_35750 (cafA)
Messenger RNA biogenesis [BR:
atk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AUTU_35750 (cafA)
Ribosome biogenesis [BR:
atk03009
]
Prokaryotic type
rRNA processing factors
AUTU_35750 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
DnaJ_CXXCXGXG
Orange_C
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
BDD06092
LinkDB
All DBs
Position
complement(4291606..4293156)
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AA seq
516 aa
AA seq
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MSSELFIAGDKNDSRMALLQDKKLVEFNQEAGGNKFNVGDIYLGTVRKIVPGLNAAFIDI
GYEKDAFLHYLDLGPQVSSLNKYLKMTQNRKNSSYKLANFKMEPDIDKHGKINQVLSKNQ
QILVQVVKEPISTKGPRLSCELSIAGRYIVLVPFSNSVNISKRVTSKEERKRLVRLITSI
KPEGFGVIIRTVAEGKDVAELDRDLRDLVSKWKNGVKALSGAKSRDLVIGELNRASSMLR
DLLSESFDAIYADDKDIYEDIKSYISTIEPEKEKIVKHYTGKVKLFENFGIEKQVKSLFG
QSVSLPNGGYLIVEHTEACHVIDVNSGNKSNAESDQETTAVKVNLESAKEIARQLRLRDM
GGIIIIDFIDMKSPENKRLIFEKMKEEMKGDRSKFTILPLTKFGLMQITRQRVRPEMNIT
TREKCPTCGGTGKVTATILVTDHIERDLEYILTKQNESGLTISLHPFLFAFYTKGIISRR
VRWYFKYWKWVKLELDTSLAITDYVFKNSQGDVIEI
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagtgaattatttattgctggagacaaaaatgatagtcgtatggccctgttgcag
gacaagaagcttgtcgagttcaatcaggaagctggaggaaataagtttaatgtaggtgat
atctacctagggactgtacgcaagatcgttccgggattgaatgccgctttcatagacata
ggctatgaaaaagacgcatttctgcattatcttgatttggggcctcaagtgagctcattg
aacaaatacttgaaaatgacgcagaataggaagaactcttcctataaacttgctaatttc
aagatggagcccgacatagacaagcatggaaagataaatcaagtgctgagtaaaaaccag
cagattcttgtccaagtcgtaaaggagcctatatcaaccaaagggccaagattatcttgt
gaattatccattgctggcagatatattgtgttggtgcctttttcgaatagtgtaaatatt
tcgaaaagagttactagcaaggaagagcgaaaaaggctagttagattgattacttctatt
aagcctgaaggctttggagttatcatcaggacagtcgccgaaggcaaagatgtggctgag
ctggatcgcgatcttagagatcttgtaagcaaatggaaaaatggagtaaaagcgctaagc
ggcgctaagtcaagggatttggtgattggagagctaaatagagcctcttcaatgcttaga
gaccttctttccgaatcttttgatgctatttatgctgatgataaggatatctatgaagat
atcaaatcttacataagcacaattgaaccggaaaaagaaaagattgtcaagcactatact
gggaaagtgaagttgtttgagaattttgggattgaaaaacaagtgaaatccttgtttggt
caatcagtgagtttgcctaacggagggtatttgattgtggagcatactgaagcttgccac
gtcatagatgtcaacagcggtaataaatccaatgctgagtcggatcaagagactaccgcc
gtgaaagtaaacttggaatcggctaaagaaatcgcccgtcagctaaggctgagagatatg
gggggaattatcatcatagatttcatagatatgaaatcccccgaaaacaaacgccttatc
ttcgaaaagatgaaggaggaaatgaagggcgacaggtcaaagtttacgatattgccgttg
actaaatttggcttgatgcaaattactcgacaaagagtaaggccggaaatgaatattaca
acacgtgagaaatgtcctacgtgtgggggtactggcaaagtaaccgcgacaatattggtc
accgaccacatcgaacgtgatttagagtatatcttgacaaagcaaaatgagtcaggatta
acaatttcacttcatccctttttgtttgcattttatacaaagggaattatttccaggcgt
gttcgatggtatttcaaatactggaaatgggtaaaattagaactggatacatcactggca
ataacggattatgtatttaaaaatagccagggagatgtaatcgagatttaa
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