Aureibacter tunicatorum: AUTU_38740
Help
Entry
AUTU_38740 CDS
T09744
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
atk
Aureibacter tunicatorum
Pathway
atk03410
Base excision repair
atk03430
Mismatch repair
atk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AUTU_38740
03430 Mismatch repair
AUTU_38740
03440 Homologous recombination
AUTU_38740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atk03400
]
AUTU_38740
DNA repair and recombination proteins [BR:
atk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AUTU_38740
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AUTU_38740
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AUTU_38740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Toprim
DSPc
Motif
Other DBs
NCBI-ProteinID:
BDD06391
LinkDB
All DBs
Position
4670760..4672460
Genome browser
AA seq
566 aa
AA seq
DB search
MVKRWIYKDFPEESDVIRLSSEINVNKTIASVLLQRGIQNFDHAKKYFRPSLDDLYDPFL
MKDMDKAVERIAQAIKQREKILIYGDYDVDGTTSVALVYKFLKLYYPNCEYYIPDRYKEG
YGVSQKGIETAKEKNIKLIISLDCGIKAIDRIATAKSYGIDFIVCDHHLPGEDLPQAVAV
LDPKRKDCPYPFKELSGCGVGFKLMQGFARYMEYDDNELMNSLDLLAVSIASDIVPIVDE
NRILAHFGLQQLNKKPSPGLQALIDLGNKSRMTISSIVFGIGPRINAAGRIAHANAAVDL
LLAEGEEEASFLANKVNENNTIRKNVDSNITAEAIKMIEENDPSFDKKATVLFKSDWHKG
VVGIVASRCIDKYYRPTIILTESNRKATGSARSVHGFDIYEAISDCSEYLDQYGGHMYAA
GLTLDIEKVDAFKEKFEKIVEERISDEQLIPQIEVDYMLDFDQINFKFFNILKQMAPFGP
ENMQPVFVSKDLKICERPRILKEEHIKFKVTQEGSSTVMEAIGFGFAQYFELINSGMRFR
MAYTIEENNFKDNKSLQLYIKDIKFD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaagatggatatataaagatttccctgaagaaagcgatgtcattcgcctctct
tctgaaatcaatgtgaataaaactatagcatctgtgctgttacagagaggaatccaaaat
tttgaccacgctaagaaatattttaggccttcattggatgatctgtatgatccattcttg
atgaaggatatggacaaagctgtagagcgcatagctcaagctatcaagcaaagggaaaaa
atccttatttacggcgattatgatgtggatggcactacttcggtggctttagtctacaaa
ttccttaagctctattatcccaattgcgaatattatattccagatcgatataaagaaggg
tatggtgtttcccaaaaaggcatcgaaactgccaaagaaaaaaatatcaagctcatcatt
agcttggattgcggtatcaaagccatagaccgcattgccacggctaaatcatatggcata
gactttatcgtatgcgatcatcacttgcctggcgaagatttgcctcaagctgtcgctgtg
ctggatcctaagcgaaaagattgcccttatccattcaaggagctttccggttgcggcgta
ggcttcaagcttatgcaagggtttgctaggtacatggaatacgatgacaacgagttgatg
aactcattggacttattggcagtaagcattgcttcagatatagtgcctattgttgatgaa
aacagaattctcgcgcactttgggcttcagcaattaaataaaaagccaagcccggggctt
caagctcttatcgacctaggcaataaatctcgaatgacaatttcatcgatagtattcggc
ataggcccaagaatcaatgccgcgggaagaatagctcatgctaacgccgctgtggatttg
cttttggcagaaggggaagaagaagcctcttttcttgccaataaggttaatgaaaacaac
accattcgaaagaatgtggacagcaatattacagctgaggcaatcaaaatgatcgaagag
aacgatccgtcattcgacaaaaaagcaaccgttcttttcaaaagcgactggcataaaggc
gtagttgggattgtcgcctctcgttgcatagacaaatattatcgcccgacgatcatttta
acagaatcaaaccgcaaagctactggatcggctagatcagtacacggctttgatatctac
gaagcgatttccgactgttcggaatatcttgaccaatatggcgggcatatgtacgccgca
ggacttactttggacattgaaaaagttgacgctttcaaagaaaagttcgagaagattgtg
gaagaaagaatctctgatgaacaactgatcccgcaaatcgaagttgattatatgcttgac
ttcgaccagatcaactttaagttcttcaatattctgaagcaaatggctccttttggtcct
gagaacatgcaaccggtatttgtcagcaaagatctgaaaatttgcgaacgtccaagaata
ctaaaagaagaacacatcaaattcaaagtgactcaagaaggctctagcacagtcatggaa
gctataggctttggttttgctcaatactttgaattgatcaatagcggaatgagatttaga
atggcttatactattgaagaaaacaacttcaaagacaataaaagcctgcaattatatatt
aaagatataaagtttgattag
DBGET
integrated database retrieval system
