Actinocatenispora thailandica: Athai_02290
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Entry
Athai_02290 CDS
T07045
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
atl
Actinocatenispora thailandica
Brite
KEGG Orthology (KO) [BR:
atl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atl03032
]
Athai_02290 (topA)
03400 DNA repair and recombination proteins [BR:
atl03400
]
Athai_02290 (topA)
Enzymes [BR:
atl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Athai_02290 (topA)
DNA replication proteins [BR:
atl03032
]
Prokaryotic type
DNA Topoisomerases
Athai_02290 (topA)
DNA repair and recombination proteins [BR:
atl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Athai_02290 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
DUF3807
Motif
Other DBs
NCBI-ProteinID:
BCJ32726
UniProt:
A0A7R7DJJ2
LinkDB
All DBs
Position
243155..246001
Genome browser
AA seq
948 aa
AA seq
DB search
MPRSESSNRLVIVESPAKAKTISGYLGPGWVVEASRGHIRDLPSGAKEVPEKYKGTPMAR
LGVDPEHDFAPLYVVSPDRKAQVTRLKGLLKDADELFLATDEDREGEAIAWHLEQLLKPK
VPVHRMVFHEITRPAIQAAVANPRTINQNLVDAYEARRVLDRLYGYEVSPVLWKKIMPKL
SAGRVQSVATRIVVERERQRMAFHSADYWDIQATLAVAAADVKDGPRTFGGTLIALDGDR
VATGRDFDPATGRVRPNSGAIPLDEEGARGLAARLDGRDFTVTRVEEKPYRRRPYAPFMT
STLQQEASRKLRFSSETTMRVAQRLYENGYITYMRTDSTTLSDTALSAARSQVAELYGSR
YVPAEPRQYTRKVKNAQEAHEAIRPAGEHFRTPGSLANELSPDEFRLYELIWRRTIASQM
IDAVGNSVSVRINAVSTTGESADFAASGKTITEPGFLRAYVESTDDENAEAEDAERRLPN
LVRDQPLTADALEPTGHTTQPPARYTEASLVKALEELGIGRPSTYTSIMQTIQRRGYVFK
RGQALIPSFVAFAVVQLLESYFPRLVDYDFTAGLENDLDEITDGRVQTLGFLRSFYFGDD
AAEAGSVARSGGLKRLVTEQLSEIDARGINSIPLFTDDEGRKVVVRVGRYGPYLERRTPG
DEDTEPDPDAPRRNVSVPDDVVPDELTPAKVEELFKSNSGARELGTDPATGEVVTLKSGR
FGPYVTSGEKSSSLFSSHSMDTLTLDDALKLLSLPRTVGTAPDGEPVTAQNGRYGPYIRK
GTDSRSLESEEQIFTVTLEEAEKLFAEPKRRGRRAAPKEPLRTLGDDPATGKPIVVKDGR
FGLYVTDGETNRTLPRTETAESITLDRAAELLADKRAQGPAPRKKAAKKTAAKKTAAKKT
AAKKTAAKKTAAKKTAAKKTAAKKTAAKATAKKAPAKKAAPKKSTSDD
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgatccgagagcagcaaccggctggtcatcgtcgagtccccggcgaaggccaag
accatctcgggctacctgggcccggggtgggtcgtggaggcgagtcgtggccacatccgc
gacctgcccagcggcgccaaggaggtgcccgagaagtacaagggcacgccgatggcgagg
ctcggcgtcgacccggagcacgacttcgcaccgctctacgtcgtctcgccggaccgcaag
gcgcaggtgacccggctcaagggcctgctgaaggacgccgacgagctcttcctcgccacc
gatgaggaccgcgagggcgaggcgatcgcctggcacctggaacagctgctcaagccgaag
gtgccggtgcaccggatggtcttccacgagatcacccggccggcgatccaggcggcggtg
gccaacccgcgcacgatcaaccagaacctggtcgacgcgtacgaggcgcgccgggtgctg
gaccggctgtacgggtacgaggtcagcccggtgctgtggaagaagatcatgccgaagctg
tcggccggccgggtgcagtcggtggcgacgcgcatcgtggtcgagcgcgagcggcagcgg
atggcgttccactcggccgactactgggacatccaggccaccctcgcggtggcggcggcc
gacgtgaaggacggcccgcgcaccttcggcgggacgctgatcgcgctggatggtgaccgg
gtcgcgaccggccgcgacttcgacccggcgaccggccgggtgcggcccaactcgggtgcg
atcccgctggacgaggagggtgcgcgcgggctcgcggcccggctcgacggccgcgacttc
accgtcaccagggtcgaggagaagccgtaccggcgccggccgtacgcgccgttcatgacc
tcgacgctgcagcaggaggcgtcccgcaagctgcgcttctcgtccgagaccacgatgcgg
gtggcgcagcggctgtacgagaacggctacatcacctacatgcggaccgactcgacgacg
ctgtcggacaccgcgctgtcggcggcccggtcgcaggtcgccgagctgtacggcagccgg
tacgtgccggccgaaccccggcagtacacccgcaaggtgaagaacgcgcaggaggcgcac
gaggcgatccgcccggccggcgagcacttccgcaccccgggttcgctggccaacgagctg
tccccggacgagttccggctgtacgagctgatctggcggcgcaccatcgcctcgcagatg
atcgacgcggtgggcaactcggtgtcggtgcggatcaacgcagtgtccaccaccggcgag
tcggccgacttcgcggcgtccggcaagacgatcaccgagccgggcttcctgcgggcgtac
gtcgaatcgaccgacgacgagaacgccgaggccgaggacgccgagcgccggctgcccaac
ctggtccgtgaccagccgttgaccgccgacgcgctggagccgaccgggcacaccacccag
ccgccggcgcggtacacggaggcgtcgctggtcaaggcgctggaggagctcggcatcggc
cgcccctccacctacacctcgatcatgcagacgatccagcgccgcgggtacgtgttcaag
cgcgggcaggcgctgatcccgtcgttcgtggcgttcgcggtggtgcagctgctggaaagc
tacttcccgcggctggtcgactacgacttcaccgccgggctggagaacgacctggacgag
atcaccgacggccgggtgcagacgctcgggttcctgcgctcgttctacttcggtgacgac
gccgcggaggcgggttcggtggcccgctccggcgggttgaagcggctggtcaccgagcag
ctgtcggagatcgacgcgcgcgggatcaactcgatcccgctgttcaccgacgacgagggc
cgcaaggtcgtcgtccgggtcgggcggtacgggccgtacctggagcggcggactccgggt
gacgaggacaccgagccggacccggacgcgccgcgccgcaacgtgtccgtcccggacgac
gtggtgcccgacgagctgactccggcgaaggtcgaggagctgttcaagagcaactccggc
gcccgcgagctgggcaccgacccggcgaccggcgaggtggtgacgctcaagtcgggccgg
ttcggaccgtacgtgacgtccggcgagaagtcctcctcgctgttctcgtcgcactcgatg
gacacgctgacgctggacgacgccttgaagctgctgtcgctgccgcgcaccgtcggtacc
gcgccggacggtgaaccggtgaccgcgcagaacggccggtacgggccgtacatccggaag
ggcaccgactcgcggtcgctggagtccgaggagcagatcttcacggtcaccctggaggag
gccgagaagctgttcgcggagccgaagcggcggggccggcgggcggcgccgaaggagccg
ctgcgtaccctcggtgacgatccggcgaccggtaagccgatcgtggtgaaggacggccgg
ttcgggctgtacgtcaccgacggcgagacgaaccgcaccctgccgcgtaccgagaccgcc
gagtcgatcacgctggaccgggcggccgaactgctggcggacaagcgtgcccagggcccg
gccccgcgcaagaaggcggccaagaagaccgcggccaagaagaccgcggccaagaagacc
gctgcgaagaagacggcggccaagaagaccgccgcgaagaagacggccgccaagaagacc
gccgccaagaagaccgcggcgaaggccaccgcgaagaaggcgccggccaagaaggcggcc
ccgaagaagtccacctcggacgactga
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