Actinocatenispora thailandica: Athai_03540
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Entry
Athai_03540 CDS
T07045
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
atl
Actinocatenispora thailandica
Brite
KEGG Orthology (KO) [BR:
atl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atl03016
]
Athai_03540
Enzymes [BR:
atl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Athai_03540
Transfer RNA biogenesis [BR:
atl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Athai_03540
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
BCJ32851
UniProt:
A0A7R7DJY0
LinkDB
All DBs
Position
378461..379027
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AA seq
188 aa
AA seq
DB search
MRLFVAVRPSTEALAELGALVDGLAASRAGARLADRSRWHVTVAFLGEVPENRVPDVSAA
LTAAAGPAAPLRLRLAGGGRFGRGRFAVLWAGVDGATDGALDAFAGLARSVRRELRRARL
PYDDKPFRPHLTLARPGAKLGAAELTADVELLRGFTGVAFPVDRLLLFRSELGPQPSHHL
LSEHLLTG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctgttcgtcgcggtccggccgtcgacggaggctctcgccgagctcggcgcgctg
gtcgacgggctcgccgcgtcccgggccggcgcccggctggccgatcggtcccggtggcac
gtgaccgtcgcgttcctcggcgaggtgccggagaaccgggttccggatgtgtcggcggca
ctgaccgccgccgccggtcccgccgcgccgctgcggttgcggttggccggcggcggtcgg
ttcggccggggcaggttcgcggtgctctgggccggcgtcgacggtgccaccgacggcgca
ctcgacgcgttcgccgggctggcccgcagcgttcggcgggagctgcgccgggcccggctg
ccgtacgacgacaagccgttccggccgcacctgacgctggcccggcccggcgcgaaactc
ggcgcggccgagctgaccgccgacgtcgagctgctgcgcggcttcaccggcgtggcgttc
ccggtcgaccggctgctgctgttccgcagcgagttgggcccgcagccgagtcatcacctg
ctcagcgagcaccttctcaccggctga
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