Actinocatenispora thailandica: Athai_06650
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Entry
Athai_06650 CDS
T07045
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
atl
Actinocatenispora thailandica
Brite
KEGG Orthology (KO) [BR:
atl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atl03021
]
Athai_06650
Transcription machinery [BR:
atl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Athai_06650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
HTH_28
Sigma70_ECF
HTH_23
HTH_3
KORA
HTH_IclR
NirdL-like_HTH
IF2_N
DUF7343
HTH_15
Motif
Other DBs
NCBI-ProteinID:
BCJ33162
UniProt:
A0A7R7DK26
LinkDB
All DBs
Position
complement(723749..724675)
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AA seq
308 aa
AA seq
DB search
MTAAPRRLDGTSRRTDPGSRAPSQRQPAGPSRTEPPRAGPAHGAPTHGAPTRGKPRGIPR
QSPAYAEEACTGELLARLGRSHPGEPEWSALRAELCRRHRSLVRALAWRFRGRGEDLDDL
VQVGTVGLLHAIDRFDPGCGAEFTSYATPTIVGELKHHLRDRAGTVRVPRRLQERHAAVS
AASVRLYQRLGRSPTVHELAEAAGLTDEEVLEALEVAQVSTTIPLDDSDSGADTAALDSA
DALAGVENRAALRPLLDRLAPRDKRIIVLRFFAHRTQSEIAAELGISQVQVSRLLTRTLA
TLRTALAD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgcgccgcgccgcctggacggcacgtcccggcggaccgacccgggcagccgg
gcgccgagccaacgccagccggccggcccgtcccgtaccgaaccgccccgcgccggaccg
gcgcacggtgcgccgacgcatggtgcaccgacgcgcggcaagccccgcggcatcccccgg
cagtccccggcgtacgcggaggaagcctgcaccggtgagctgctggcccggctcggccgc
agccaccccggcgagcccgagtggtcggcgctgcgcgccgagctgtgccgccggcaccgg
tcgctggtgcgggcgctggcctggcggttccgcggccggggcgaggacctggacgacctg
gtccaggtcggtacggtcgggctgctgcacgccatcgaccggttcgaccccggctgcggg
gcggagttcaccagctatgccacgccgacgatcgtcggcgaactcaaacatcacctgcgg
gaccgggccggcaccgtccgggtgccgcgccggctgcaggagcggcacgccgcggtgtcc
gccgcctcggtccggctgtaccagcggctcggccgttcccccaccgtgcacgaactcgcc
gaggcggccgggctgaccgacgaagaggtgctggaggcgctggaggtggcgcaggtcagc
accacgatcccactggacgacagcgattccggcgccgacaccgccgcgctggacagcgcc
gacgccctcgccggggtcgagaaccgggccgcgttgcggccgctgctcgaccggctcgca
ccccgggacaagcgcatcatcgtgctgcgtttcttcgcccaccgcacccagtccgaaatc
gccgccgagctcggcatctcccaggtgcaggtgtcccgcctcctcacccgcaccctcgcc
accctccgcaccgccctcgccgactga
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