Actinocatenispora thailandica: Athai_16150
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Entry
Athai_16150 CDS
T07045
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
atl
Actinocatenispora thailandica
Pathway
atl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Athai_16150 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atl03019
]
Athai_16150 (deaD)
03009 Ribosome biogenesis [BR:
atl03009
]
Athai_16150 (deaD)
Enzymes [BR:
atl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Athai_16150 (deaD)
Messenger RNA biogenesis [BR:
atl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Athai_16150 (deaD)
Ribosome biogenesis [BR:
atl03009
]
Prokaryotic type
rRNA helicases
Athai_16150 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
AAA_30
CMS1
HEM4
UvrA_inter
adh_short
Motif
Other DBs
NCBI-ProteinID:
BCJ34112
UniProt:
A0A7R7DMI4
LinkDB
All DBs
Position
complement(1809423..1811258)
Genome browser
AA seq
611 aa
AA seq
DB search
MSVVRTGADGATATRSMSRHRGNRGEAANAFHYDLLVPDTETTPTFDDLGLDGRIIKALR
DVGYETPSNIQAETIPLLLAGAHVVGLAQTGTGKTAAFALPILSRIDLTQKAPQVLVLAP
TRELALQVSEAFERYAAHIKGLHVLPVYGGQGYGVQLSALRRGVHVVVGTPGRVMDHLEK
GTLDLSQLRFVVLDEADEMLNMGFAEDVEQILADTPDDKQLALFSATMPAQIRRMVTKHA
PDAVEVSVKGRTTTAANVRQRYLKVAHAQKLEALTRILEVENFDGLILFARTKQATEELA
ERLRARGFSAAAINGDIAQAQRERTINQLRSGKLDILVATDVAARGLDVERISHVVNYDL
PTDSEPYVHRIGRTGRAGRSGDAISFVTPRESHLRRAIERSVGVKLDEMSLPTVEDVNAQ
RIEKFTAAISNAMEDAQFANFRDLVQDYERGHDVPALDIAAALAVLAQDGQPLLLEEAPE
PPRPERHRPREQQRMATYRIAVGKRHHVEPRMIVGALANEGGLARSDFGRIDIRPTHSLV
ELPAELPAATFERLADTRISGMLIDLRPDRGFGPGAGTRRGRPAGDRPERARTARPADGR
ARKPRHKKHDR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggtacgcaccggtgccgacggggccaccgccacccggtcgatgtcccggcac
cgggggaaccgcggtgaggccgcgaacgctttccactacgatctgttggtgcccgatact
gaaacgacgccgactttcgatgaccttggcctggacggaaggatcatcaaggcacttcgg
gacgtcggctacgagaccccttcgaacatccaggcggagaccatcccgctgctgctcgcc
ggagcgcacgtggtcggcctggcccagacgggcaccggcaagaccgccgcgttcgcgctg
ccgatcctgtcccggatcgacctgacccagaaggcgccacaggtgctggtcctcgcgccg
acccgggagctggcgctgcaggtgtccgaggcgttcgaacgttacgccgcgcacatcaag
gggctgcacgtgctgccggtctacggcggccaggggtacggcgtccagctctcggcgctg
cgccgcggggtccacgtcgtcgtcggcacccccggacgggtgatggaccacctggagaag
ggcaccctggacctgagccagctgcgcttcgtggtcctcgacgaagccgacgagatgctc
aacatgggtttcgccgaggacgtggagcagatcctcgccgacaccccggacgacaagcaa
ctggcgctgttctcggcgaccatgccggcccagatccgccggatggtcaccaagcacgca
cccgacgccgtcgaggtgagcgtcaagggcaggaccacgacggcggccaacgttcggcag
cggtacctcaaggtcgcgcacgcgcagaagctggaggcgctcacccgcatcctggaggtg
gagaacttcgacgggttgatcctgttcgcccgcaccaagcaggccaccgaggagctggcc
gagcggctccgggcccgagggttctccgccgcggccatcaacggcgacatcgcccaggcg
cagcgggaacgcaccatcaaccagctgcgttccggcaagctcgacatcctggtggccacc
gatgtcgccgcgcgcgggctggacgtcgagcggatcagccacgtcgtcaactacgacctg
ccgaccgactccgagccgtacgtgcaccgcatcggccggaccggccgggccggccgcagc
ggcgacgcgatctcgttcgtcaccccgcgggagagccatctgcggcgggcgatcgagcga
tcggtcggggtcaagctcgacgagatgagcctgccgaccgtcgaggacgtgaacgcgcag
cggatcgagaagttcaccgccgcgatctccaacgccatggaagacgcgcagttcgcgaac
ttccgggacctggtgcaggactacgagcgcgggcacgacgttcccgcgctggacatcgcc
gccgccctcgccgtactcgcccaggacggccagccgctgctgctggaggaggcgcccgaa
ccgccgcggcccgagcggcaccggccgcgcgagcagcaacggatggcgacgtaccggatc
gcggtgggcaagcgccaccacgtcgaaccacgcatgatcgtcggcgcgctcgccaacgag
ggcggcctcgcccggtcggacttcggccgcatcgacatccgcccgacgcacagcctggtc
gagttgcctgccgagctgcccgcggcgaccttcgaacggctcgccgacacccggatctcg
ggcatgctgatcgacctgcgcccggaccgcggtttcgggcccggcgcgggcacccggcgc
ggccggccggccggtgaccggccggagcgcgcccggaccgcccggccggccgacggccgg
gccaggaagccgcggcacaagaagcacgaccgctga
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