Actinocatenispora thailandica: Athai_23780
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Entry
Athai_23780 CDS
T07045
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
atl
Actinocatenispora thailandica
Pathway
atl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Athai_23780 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atl03019
]
Athai_23780 (pnp)
03016 Transfer RNA biogenesis [BR:
atl03016
]
Athai_23780 (pnp)
Enzymes [BR:
atl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Athai_23780 (pnp)
Messenger RNA biogenesis [BR:
atl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Athai_23780 (pnp)
Transfer RNA biogenesis [BR:
atl03016
]
Prokaryotic type
tRNA degradation factors
Athai_23780 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
KH_PNO1_2nd
KH_NusA_1st
OB_cyt-4
Motif
Other DBs
NCBI-ProteinID:
BCJ34875
UniProt:
A0A7R7DNB0
LinkDB
All DBs
Position
2633022..2635367
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AA seq
781 aa
AA seq
DB search
MTETTGYEPEVVNLGTHSSQAVIDNGDFGTRTITFSTGRLAQQAAGSVLAQLGDTVVLSA
TTAGKHPKEQFDFFPLTVDVEEKMYAVGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSF
VKGLRNEVQVVETVLALDPQHAYDVVAINAASASTQLSGLPFSGPIGATRVVHVDGQWVA
FPTQEERERATFDMVIAGRLLDDGDVAVMMVEAEGTPATVDLVRGGAVAPTEEIVAQGLE
AAKPHLAELCRAQQRLADAAGKATVEFPVFLDYEPDAYDAVEQAISGELAEALKIGAKQE
RESELDRVKELAYERVGANFEGREKEIGAAVKAVTKKLVRQRILRDQVRIDGRGPRDIRP
LSAETHILPRVHGSALFERGETQIMGVTTLNMLRMEQSLDTLAPEKSKRYMHNYNFPPYS
TGETGRVGSPKRREIGHGRLAERALVPVLPKREDFPYAIRQVSEALGSNGSTSMGSVCAS
TMSLMSAGVPIAAPVAGIAMGLVSDTVDGKTEYLAITDILGAEDAFGDMDFKVAGTSEFV
TALQLDTKLDGIPSEVLAQALQQAREARATILEVMGAAIAQPAEMSDYAPRVTTVKVPVD
KIGMVIGPKGQTINAIQDETGAELSIEDDGTIYIGASDGPSAQAAVERVNAIANPTLPKK
GDRYLGTVVKTAAFGAFISLVPGRDGLLHISKLGGNKRVERVEDYLNVGDKVEVEIVDVD
NRGKVYLDLVKPEEEQAEQAAEPAGEAAPAKAEDAESGAEHSDGGEHRDGGERRRRRSRH
H
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaccaccgggtacgaacccgaggtcgtcaacctgggcacccactcgtcccag
gccgtgatcgacaacggcgacttcggcacccgtaccatcacgttctccaccgggcggctc
gcgcagcaggccgccggctcggtgctcgcccagctgggcgacaccgtggtgctgtcggcg
accaccgccggcaagcaccccaaggagcagttcgacttcttcccgctgaccgtggacgtc
gaggagaagatgtacgcggtgggccggatccccggctcgttcttccgccgcgagggccgg
cccagcgaggacgcgatcctcacctgccggctgatcgaccgcccgctgcgtcccagcttc
gtcaagggcctgcgcaacgaggtccaggtcgtcgagacggtgctggcgctggacccgcag
cacgcgtacgacgtggtcgcgatcaacgccgcatcggcctccacccagctgtccgggctg
ccgttctccggcccgatcggcgccacccgcgtggtgcacgtcgatggccagtgggtggcg
ttcccgacccaggaggagcgcgagcgcgccaccttcgacatggtcatcgccggccggctg
ctcgacgacggtgacgtcgccgtgatgatggtcgaggccgagggcaccccggccaccgtc
gacctggttcgcggtggcgcggtcgcgccgaccgaggagatcgtcgcgcaggggctggag
gcggcgaagccgcacctggccgagctgtgccgggcgcagcagcggctggccgacgccgcc
ggcaaggcgaccgtcgagttcccggtcttcctggactacgagccggacgcgtacgacgcg
gtcgagcaggcgatctccggtgagctggccgaggcgctgaagatcggtgccaagcaggag
cgcgagagcgagctggaccgggtcaaggagctcgcctacgagcgggtcggcgccaacttc
gaggggcgcgagaaggagatcggtgccgcggtcaaggcggtcaccaagaagctcgtccgg
cagcgcatcctgcgtgaccaggtccgcatcgacggccgcggcccgcgcgacatccggccg
ctgagcgccgagacgcacatcctgccgcgggtgcacggttcggcgctgttcgagcgcggc
gagacccagatcatgggtgtcaccacgctgaacatgctgcgcatggagcagagcctggac
accctcgcgccggagaagtccaagcggtacatgcacaactacaacttcccgccgtactcg
accggtgagaccggccgggtcggctccccgaagcggcgcgagatcggccacggccggctc
gccgagcgggcgctggtgccggtgctgcccaagcgggaggacttcccgtacgcgatccgg
caggtctccgaggcgctcgggtccaacgggtcgacctcgatgggttcggtctgcgcctcg
acgatgagcctgatgtcggccggcgtgccgatcgccgcgccggtcgccgggatcgcgatg
ggcctggtgtccgacacggtcgacggcaagaccgaatacctggccatcaccgacatcctc
ggcgccgaggacgcgttcggcgacatggacttcaaggttgccggtaccagcgagttcgtc
accgccctgcagttggacaccaaactggacggcatcccgtccgaggtgctggcgcaggcg
ttgcagcaggcccgcgaggcccgcgcgacgatcctggaggtcatgggcgcggcgatcgcg
cagccggccgagatgagcgactacgcgccgcgggtgaccacggtgaaggtcccggtcgac
aagatcggcatggtgatcgggccgaagggccagaccatcaacgcgatccaggacgagacc
ggcgccgagctgtccatcgaggacgacggcacgatctacatcggggcgtccgacggtccg
tcggcgcaggccgcggtggagcgggtcaacgcgatcgccaacccgacgctgccgaagaag
ggcgaccggtacctcggtaccgtcgtgaagaccgcggcgttcggcgcgttcatctcgctg
gtgcccggccgggacgggctgttgcacatctccaagctgggcggcaacaagcgcgtcgag
cgggtcgaggactacctgaacgtcggggacaaggtcgaggtcgagatcgtcgacgtcgac
aaccgcggcaaggtctacctcgacctggtcaagccggaggaggagcaggccgagcaggcg
gcggagcccgccggcgaggcggccccggcgaaggcggaggacgccgagagcggcgccgag
cacagcgacggcggcgagcaccgcgacggtggcgagcgtcgtcggcggcgcagccggcac
cactga
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