Actinocatenispora thailandica: Athai_53050
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Entry
Athai_53050 CDS
T07045
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
atl
Actinocatenispora thailandica
Pathway
atl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Athai_53050 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atl03019
]
Athai_53050 (groL1)
03110 Chaperones and folding catalysts [BR:
atl03110
]
Athai_53050 (groL1)
03029 Mitochondrial biogenesis [BR:
atl03029
]
Athai_53050 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atl04147
]
Athai_53050 (groL1)
Enzymes [BR:
atl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Athai_53050 (groL1)
Messenger RNA biogenesis [BR:
atl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Athai_53050 (groL1)
Chaperones and folding catalysts [BR:
atl03110
]
Heat shock proteins
HSP60 / Chaperonin
Athai_53050 (groL1)
Mitochondrial biogenesis [BR:
atl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Athai_53050 (groL1)
Exosome [BR:
atl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Athai_53050 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
Athai_53050 (groL1)
Exosomal proteins of breast cancer cells
Athai_53050 (groL1)
Exosomal proteins of colorectal cancer cells
Athai_53050 (groL1)
Exosomal proteins of bladder cancer cells
Athai_53050 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BCJ37802
UniProt:
A0A7R7DUR5
LinkDB
All DBs
Position
complement(5863621..5865255)
Genome browser
AA seq
544 aa
AA seq
DB search
MPKILSFSDDARKGLERGVNALADAVKVTLGPRGRNVVLDKKFGAPTITKDGVTVAKEIE
LTDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQAMVREGLRNVAAGANPTALKRGID
AAVAAISDELVAKATEVDTQERIAHVATVSAQDATIGELIAEAMERVGREGVITVEDGST
LTTELEITEGMQFDKGYLSPHFVTDPEAGEAVLEDAHILITTEKISSVEDLLPILEKVLE
TSKPLLIIAEDVDGQALSTLAVNSIRKTLKACAVKAPGFGDRRKAMLQDLAILTGAEVIA
PELGYKLDSVGLEVLGSAHRVVVTKETTTVVDGAGSDTAVADRVTQIKREIDESDSDWDK
EKLNERLAKLSGGVAVIKVGAATEVEMKEKKHRIEDAISATKAAVEEGTVPGGGATLVQV
AGKLEGGLGLSGDEATGVKLVRTSLDAPLRWIAENAGRDGYVAVERVREADFGTGLNAAT
GEYVELAKAGIIDPVKVTRNAVANAASIASLLLTTESLVADKPEEPEAPAAGGHGHGHQH
GPGF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagattctcagcttctccgacgacgcccggaaaggtctggagcgcggggtcaac
gcgctcgccgatgcggtcaaggtgaccctcggtccgcgcgggcgcaacgtcgtactggac
aagaagttcggcgctccgacgatcaccaaggacggcgtcaccgtcgccaaggagatcgag
ctcaccgacccgtacgagaacctcggcgcgcagctcgccaaggaggtcgccaccaagacc
aacgacgtggccggcgacggtacgaccacggcgacggtgctggcccaggcgatggtccgg
gagggtctgcgcaacgtggccgccggcgccaacccgaccgcgctgaagcggggcatcgac
gcggcggtcgcggcgatctccgacgagctggtcgccaaggccaccgaggtggacacgcag
gagcgcatcgcgcacgtcgcgacggtctccgcgcaggacgccaccatcggtgagctgatc
gccgaggcgatggagcgggtcggtcgggaaggcgtcatcaccgtcgaggacggttccacg
ctcaccaccgagctggagatcaccgaggggatgcagttcgacaagggctacctctcgccg
cacttcgtcaccgacccggaggccggtgaggcggtgctggaggacgcgcacatcctcatc
accaccgagaagatctcctcggtcgaggacctgctgccgatcctggagaaggtcctggag
accagcaagccgctgctgatcatcgccgaggacgtggacggccaggcactgtcgacgctc
gccgtcaactcgatccgcaagacgctgaaggcgtgcgcggtgaaggcgcccggcttcggc
gaccgccgcaaggcgatgctgcaggacctcgcgatcctgaccggcgccgaggtgatcgca
cccgagctgggctacaagctcgactcggtcggcctggaggtgctcggcagcgcgcaccgc
gtcgtcgtcaccaaggagaccaccacggtcgtcgacggtgccggcagcgacaccgcggtc
gccgaccgggtcacccagatcaagcgcgagatcgacgagtccgactccgactgggacaaa
gagaagctgaacgagcggctcgcgaagctctccggcggcgtggcggtcatcaaggtgggc
gccgcgaccgaggtcgagatgaaggagaagaagcaccgcatcgaggacgccatctcggcg
accaaggcggcggtcgaggagggcaccgtgcccggtggcggcgccaccctggtgcaggtg
gccggcaagctcgagggcggcctcgggctgtccggtgacgaggcgaccggcgtcaagctg
gtccgcacctcgctggacgcgccgctgcgctggatcgccgagaacgccggccgggacggc
tacgtcgcggtcgagcgggtccgcgaggccgacttcggtaccggcctcaacgccgccacc
ggcgagtacgtcgagctggccaaggccggcatcatcgacccggtgaaggtgacccgcaac
gcggtcgccaacgcggcgagcatcgcgagcctgctgctcaccacggagagcctggtcgcc
gacaagccggaggagccggaggcgcccgccgccggcggccacggccacggccaccagcac
ggcccgggcttctag
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