Anaerolinea thermophila: ANT_02860
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Entry
ANT_02860 CDS
T01410
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
atm
Anaerolinea thermophila
Brite
KEGG Orthology (KO) [BR:
atm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atm03016
]
ANT_02860
Enzymes [BR:
atm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ANT_02860
Transfer RNA biogenesis [BR:
atm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ANT_02860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
BAJ62320
UniProt:
E8MZY5
LinkDB
All DBs
Position
complement(312838..313980)
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AA seq
380 aa
AA seq
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MHHQDPTAPIWVATPTALRRMMNHLLACEQIAVDTESNGLHAYQEQICLIQFSVPGADYL
VDPLASVNLSGLNEIFSNPGIEKVFHAAEYDILCLKRDFGFTFTHLFDTMIAARILGRSE
VGLAALLEEHFGVTLDKRYQRANWARRPLPPAMLNYARLDTHYLIDLRNHLAKELAERGL
TALAEEDFLRVCETPAAPAESRPPMWWDVAGTTDLPPQQASLLQALVEFREQQARFANLP
PFRVLSNAVLIQIAEANPMTLEDLAEVQGLSYAHLERYGLGIMEALRRGRTRPAPQPPGY
SRPNHQILKRLEMLKRWRKDAGRRMGVESDVILPRDTMHALAQCDVTTPEDIERLMAHLP
WRWQTFGKELIQLLVKEKIS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaccaagaccctaccgctcccatctgggtagccacccccaccgccctgcggcgg
atgatgaaccatctgcttgcctgcgagcaaattgcggtggacaccgaatccaacggcttg
cacgcttatcaggaacagatttgcctgattcagttttccgtgccgggagcagattatctg
gtggacccactggcatcggtcaatctttcggggctgaatgagattttcagcaaccccggc
atcgaaaaagtgtttcacgccgccgagtacgatatcctctgcctgaagcgtgattttggt
ttcaccttcacccatctgttcgacaccatgattgccgcccgcatcctcgggcgcagtgaa
gtcgggttggcggcactgttggaagagcatttcggcgtcaccctggacaagcgttatcag
cgcgccaactgggcgcgccgcccgctcccgcccgccatgctcaactacgccaggctggac
acccactatctgattgacctgcgtaaccacttggcaaaggaactggcagagcgtgggctg
acggcgctggccgaagaagattttctgcgggtgtgcgaaacccccgccgcgccggcagaa
tcccgtccgcccatgtggtgggatgttgccggaacaaccgatttacccccccagcaagcc
agtttgctccaggcgctggtggagttccgcgaacagcaagcccgctttgccaacctgccg
ccttttcgcgtgctctccaacgctgtgctgatacagattgccgaagccaaccccatgacg
ctggaagacctggcagaggtgcaggggctttcctatgcgcatctcgagcgctacggattg
ggcatcatggaagccctgcggcgcggcagaacccgccctgccccccaaccgcccggttac
tcccgtcccaaccatcagatactcaaacgcctggaaatgctcaagcgctggcgcaaggat
gccggcaggcgcatgggcgttgaatctgacgtcatcctgccgcgcgacaccatgcacgcg
ctggcgcagtgcgacgtcaccaccccggaagacattgaacgcctgatggcgcacctgccc
tggcgctggcaaacctttggcaaggaactcatccaactgctggtgaaagagaagatctca
tga
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