Anaerolinea thermophila: ANT_10860
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Entry
ANT_10860 CDS
T01410
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
atm
Anaerolinea thermophila
Pathway
atm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ANT_10860 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atm03021
]
ANT_10860 (rpoC)
03400 DNA repair and recombination proteins [BR:
atm03400
]
ANT_10860 (rpoC)
Enzymes [BR:
atm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ANT_10860 (rpoC)
Transcription machinery [BR:
atm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ANT_10860 (rpoC)
DNA repair and recombination proteins [BR:
atm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ANT_10860 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
DUF7432
Motif
Other DBs
NCBI-ProteinID:
BAJ63120
UniProt:
E8N3V6
LinkDB
All DBs
Position
1198295..1202524
Genome browser
AA seq
1409 aa
AA seq
DB search
METKGLTALRISLASPEHIRSWSYGEVLKPETINYRRLRPEKDGLFCEAIFGPTRDYQCY
CGKYKNPRYKGIVCDKCGVEVTRSSVRRERMGHIELATPVAHIWYTRRIPSYLGLLLDIS
RRNLDRVLYFAQYVVTHVDEDARQKALKRLEDEISVSEREQANQINEKIKEIKLDRDRKL
NELSQQKSELQARADEQIAMRLEPVIKEGQRLEAALQERMGQTVSKPIVFEAAGMTIVEA
GQTVTSAHLSMIQRTVKQRLDELESEVRDQLRRDQEQITMEMERIRAEANEAMEALRNQL
EDQAVVSQNQNSRLRDELIELRPFTFLTESRYRELKQRWGQVFRADMGAEAFYDILRRLD
LDKLAEDLWHEVRTSKSKQKRKKATIRLKVVEAFRRSGNRPEWMILTVLPVIPPDLRPMV
QLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPDVIVRNEKRMLQEAVDSLIDNSQRG
KALSRRGRRELKSLSDMLKGKKGRFRRNLLGKRVDYSGRSVIVVGPKLKLHQCGLPKTMA
LELYRPFVIAKLVAHNYAANVKGARRFIERNRPEVWEVLEEAIKERPVLLNRAPTLHRLG
IQAFEPVLIEGSAIQLHPLVTTAFNADFDGDQMAVHVPLSDKAVWEARNLMLASKNLLKP
ADGEPIISPSKDMVLGVYYLTMDDGLTNHKGEGRYFADMDEVEMAYHLGQVEVHTHIHLL
TETWYEEYEKKDRRLPKPEKRMIKTTVGRVLFNRILPDNVRFRNIVLDKGGVKDLIADVL
EVCGQEKTTVVADLIKDIGFEYAMKSGATIAVSDISIPEEKNDILAKAQAEVDQVQRAYR
RGLLTEQERNERIIEIWQQTTKIVADTVKRNMDPNGNLSTMALSGATKGGFGPIAQLAGM
RGLMADPAGRIIRLPITSNFREGLTTLEYFISTHGARKGLADTALRTADAGYLTRRLVDV
AQDIIINELDCGTREGIFIRKADDVAGQSFKERLFGRLTAERVIDPRTGEVLAERDQMLD
HELCRRIVAAGVDEVKVRSPMTCELVHGICAKCYGMDLGRGTMVELGAAVGIVAAQSIGE
PGTQLTLRTFHTGGVAAGGDITTGLPRVEELFEARRTPKGEAIVSEIAGTVRILQSDRYS
DQRLVRVERSELVSDEYEIPEGWQVMVKDEGTVSLGDPIAVLGEASITAQHAGRVRVEEN
RVIVAYEQRESEEYEIPSTARIVVKDGEHIEAGTPLTEGSLNPHMILKIKGREACQMYLL
TEIQKVYRSQGQNINDKHFEVIIRKMMGKVQVLRPGDTNYLPSDYVDRLEIRKVNEELIA
MGKQPARYAEVLLGVTKASLNTDSFLSASSFQHTIKVLAGAAIAGMKDNLYGLKENVIIG
KLIPAGTGFVHGRFANKQQEKAEEVPSQD
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaccaagggtctcaccgcactgcgtatcagtttggcttcgccggaacatattcgt
tcctggtcttatggcgaagtgttgaagccggaaaccatcaactaccggcgtttgcgccct
gaaaaagatgggctgttttgtgaagccatttttggccccacacgtgactatcaatgttac
tgtggaaaatacaaaaaccctcgctataaaggcattgtttgtgataaatgcggtgtagaa
gtcacccgttcctcggtgcgccgcgaacgcatggggcatattgaactggcgacgccggtg
gctcacatctggtacacgcgtcgcattccttcttacctggggctgctgctggatatttcc
cgccgtaacctggaccgggtgttgtattttgcgcagtatgtggttacccatgtggatgaa
gatgcgcgccagaaagccctgaagcgtctcgaggatgaaatcagcgtttcggaacgcgaa
caagccaatcaaatcaatgagaaaatcaaagagattaaactcgaccgtgatcgcaaactc
aacgaactgagccagcaaaagagtgaactgcaagcccgtgcagatgaacaaattgccatg
cggcttgaaccagtcattaaggaaggccagcgccttgaagccgctttgcaggaacgcatg
gggcaaacggtttccaagcctattgtgttcgaagccgcgggaatgaccatcgtggaggct
gggcaaacggtcacttcggcgcatctttccatgattcagcgcacggtgaaacaacgcttg
gacgaactggaaagcgaagtgcgtgaccagttgcgccgtgatcaggaacagatcaccatg
gagatggaacgcattcgcgccgaagccaatgaagccatggaagccctgcgcaaccagttg
gaagatcaggcggtagtctctcaaaatcagaactcccgtctgcgcgatgaattaattgaa
ctgcgtcccttcaccttcctcaccgagagccgttaccgtgaactcaaacagcgctggggg
caggtcttccgcgccgacatgggggctgaagccttctatgacattcttcggcgtctggac
ctggacaaactggcggaagatttgtggcacgaggtgcgcacgtccaagagcaagcagaag
cgcaagaaagccaccattcgcctcaaggttgtggaagccttccgccgttcgggcaatcgt
cctgaatggatgattctgacggttcttcctgttatcccgcccgacctgcgtcccatggtg
cagttggacggcgggcgctttgccacttctgacctgaacgacctgtaccgccgcgtgatt
aaccgcaacaatcgtctcaagcgcttgctggaactgggggctccggatgtcatcgtacgc
aatgagaagcgtatgttgcaggaagcggtggactcactgattgacaattctcagcgcggg
aaagccctctcgcgccgtggacgtcgtgaactcaagtctctcagcgatatgctgaagggc
aagaaagggcgtttccgccgcaacctgctgggtaagcgcgtggactattccgggcgctcg
gtcattgtcgtgggtccgaaactgaaactgcaccagtgcggtttgcccaagaccatggcg
ctggaactctaccgcccctttgtgattgccaaactggtggctcacaactacgctgccaat
gtcaaaggcgcacgtcgcttcattgagcgcaatcgcccggaagtttgggaagttttggaa
gaagccattaaggaacgcccggtgttgcttaaccgcgcgccgacgctccaccgtttgggt
atccaagcctttgaaccggtcctgattgaagggagcgccattcaactgcatccgctggtg
actaccgccttcaacgcggacttcgatggtgaccagatggcagtgcatgtaccgctttcc
gataaagccgtttgggaagcgcgtaacctgatgctggcttccaagaacctcctcaaaccc
gccgatggcgagccgattatcagcccgtccaaagacatggttctgggcgtatattacctg
accatggacgatggcttgaccaaccataaaggtgaagggcggtactttgccgatatggac
gaagtggaaatggcttaccatctcggtcaggtggaggtgcatactcacattcatctgctg
accgaaacgtggtacgaggaatacgaaaagaaagaccgccgtttacccaagccggagaag
cgcatgatcaagaccactgtcgggcgggtactcttcaaccgcattttgcccgataacgta
cgcttccgcaacattgtgctggacaaaggtggtgtaaaagacctgattgccgatgtgctg
gaagtgtgcggacaggaaaagaccacggtggtggcggacctgatcaaagatatcggtttc
gagtatgccatgaagtctggcgcaaccattgcggtttcagatatcagcattcccgaagag
aaaaacgatattctggcaaaagcacaggcggaagtggatcaggttcagcgtgcttaccgg
cgcggcttgcttaccgagcaggaacgcaacgagcgtatcatcgagatctggcaacagacc
accaaaatcgttgccgatacggtcaaacgcaacatggacccgaatggcaacctctccacc
atggcgctttccggtgccacgaaaggtggttttggccccatcgcacagttggcggggatg
cgtggtctgatggctgacccggctggacgcattatccgtctgcccattacctcgaacttc
cgcgaaggcttgaccacgctggagtacttcatctccacacacggtgcacgcaaaggtctg
gcagatactgccttgcgtacggctgatgctggttacctgacccgccgtctggtggatgtg
gcgcaggatattattatcaatgaacttgactgcggcaccagggaaggcattttcatccgc
aaagccgatgatgttgccggtcagtctttcaaggaacgcttgtttggacggctgaccgcc
gaacgggtcattgacccgcgcactggtgaggtgcttgccgagcgcgaccagatgcttgat
cacgaactgtgccgtcgtatcgtcgccgcgggtgtggatgaggtcaaggtacgttcaccc
atgacctgtgaactggtgcatggaatctgcgccaagtgctacggtatggatcttgggcgt
ggtacgatggtggaattgggtgctgcggtagggattgttgcggctcaatccattggtgag
cccggtacccagctgaccctgcgtaccttccacacgggtggtgtggcagcaggtggtgac
attaccaccggtttgccgcgcgtggaagaactctttgaagcccgtcgcactcccaagggt
gaagccatcgtctcggagattgccggtacggtgcgcatcctgcaatcggaccgctattct
gatcagcgtttggtgcgtgtggaacgcagtgaactggtcagcgacgaatacgaaattcct
gagggctggcaggtgatggtcaaagatgagggcacggtctctctgggtgatcccattgcc
gtgcttggcgaagccagcattaccgctcagcatgcgggacgggtgcgcgttgaagaaaac
cgtgtcattgtagcctacgaacagcgtgagagcgaggagtatgaaattcccagtaccgcg
cgcattgtggtcaaagatggcgaacacatcgaagcaggtacaccgctcaccgaagggtcg
ctcaacccgcatatgattctcaagatcaaagggcgcgaagcctgtcagatgtacctgttg
accgagattcagaaggtataccgctcgcaggggcagaacatcaatgacaagcactttgag
gttatcattcgtaagatgatgggcaaggtgcaggtgttacgacccggcgataccaactac
ctgccttcggattatgtggatcgtctggagattcgcaaggtcaacgaggaactgattgcc
atgggcaaacagcccgctcgctatgcagaagtcttgctgggtgtcacaaaagcttcgttg
aacactgactcgttcctctcggcttcgtccttccagcataccatcaaggtgttggctggt
gcggcaattgcggggatgaaggacaacctgtacggcttgaaggaaaacgtcattattggc
aaacttattccggctggtaccgggtttgtccatggacgctttgccaataaacaacaggaa
aaggctgaggaagtgccctcgcaggattag
DBGET
integrated database retrieval system
