Anaerolinea thermophila: ANT_19070
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Entry
ANT_19070 CDS
T01410
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
atm
Anaerolinea thermophila
Pathway
atm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ANT_19070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atm03019
]
ANT_19070
Messenger RNA biogenesis [BR:
atm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ANT_19070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4453
Motif
Other DBs
NCBI-ProteinID:
BAJ63933
UniProt:
E8N669
LinkDB
All DBs
Position
complement(2141345..2142991)
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AA seq
548 aa
AA seq
DB search
MSNGILRVIPLGGLGEVGRNLMVYEYDNEILVVDAGLMFPENDMLGIDYIIPDMTYLAQN
HTKVKGIVITHGHEDHIGAIHHLLDQVNAPIYATPLTRGLLEVKLGRNGHGSKADLRTVQ
AGETVQIGPFQVEFYHVCHSIPDGVGLGILTPAGLIVHSGDYKFDHTPVDGKSTDYAKLA
EFSKRGVLALLADSTNAERPGWTPSEKTIDAAFDQVFSEAKGRIIIASFASLISRMQQAA
NAALRHGRKIAFVGASMLDNMKMARKLGYLNFPDDLVIPVDQILSLPPHQVTIMCTGSQG
EPTSILGRLSLGTNRLFDIQKGDTVVLSSHPIPGNEENVYRVVNRLIARGASVIYEAIAP
VHVSGHASQEEMKLLLQLTRPKYFVPIHGELRHLVQHARLAREVGIPAENIQVIQNGMVL
EFENGEMRLSDEQVPVSHVFVDSAGVGDVDPELMREREALSRDGVVMVHLTMSKEFNAVV
YDPEIVTRGFLLPRDANELFAEMRRKIIQSASRANGNVRRVVEETVREYLYSETRRRPMV
YVTVSRSL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatggaatacttcgggtaattcctctgggcggcctgggggaagtaggccgcaat
ttgatggtgtacgaatacgataatgaaatactggtagtagatgcagggttgatgttccct
gaaaatgatatgctcgggattgattacatcattcctgatatgacctaccttgcccaaaac
cataccaaagtcaaggggattgtgattactcatgggcatgaagaccatattggcgctatt
catcatcttctagaccaggtcaatgccccaatttatgccactccactgacacgaggattg
ttggaagtaaaactgggtagaaatgggcatggtagtaaggcagatttgcgaaccgtgcaa
gccggtgaaaccgtacagattgggcccttccaggtagagttttaccatgtttgccattct
attcctgatggggttgggttgggcattctaacgccggctggcttaatcgtccattcggga
gactataagtttgatcatactcccgtggatggaaaatccacggattatgcaaagctggca
gaattttccaagcggggagtgcttgccctgctggccgattcaaccaatgccgaacgacct
ggttggacaccatctgagaaaaccattgacgctgcttttgatcaggtgttcagcgaagcc
aaagggcgaattatcattgcctcctttgcttctctgatctctcgcatgcaacaagccgcc
aatgctgctctgcgccatggaagaaagatcgctttcgtaggcgcgagcatgctcgataac
atgaaaatggcgcgtaaattgggatacttaaacttccccgatgatctggttatccctgta
gatcaaattctctccctgcctcctcatcaggtcactattatgtgcacaggttctcaggga
gagcccacttctattctggggaggctttcacttgggacaaatcgtctttttgatattcag
aaaggcgataccgtagtgttgtcctcccatcccattccagggaacgaagaaaacgtttat
cgggtggtcaaccgtttgattgcccgtggggcttctgtgatttatgaagccattgcaccg
gttcatgtgtctgggcatgcgagtcaagaagagatgaaattgcttttgcagttgacccgc
ccgaagtacttcgttcccattcatggcgaattacgtcatctggtacagcatgccaggctg
gcgcgagaagttggaattccggcagaaaacattcaggttatccagaatggtatggtgctg
gaattcgaaaatggcgaaatgcgcttgagcgatgagcaagttccagtctctcatgtattt
gtggatagtgccggggtaggcgatgttgaccctgaattaatgcgtgagcgcgaagcatta
tcccgggatggggtggtgatggtgcatttgaccatgtccaaagaattcaatgctgtggta
tatgatcccgaaatcgtgaccagaggttttctcctcccaagagatgccaatgaattgttt
gcggaaatgcgccgcaagatcattcaatctgcatcccgggctaatgggaatgtgcgccgt
gtagttgaagagacggtgagagagtatctatacagtgaaactcgacgtcgtcccatggtt
tacgtaaccgtttcaaggtccctgtaa
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integrated database retrieval system
