Anaerolinea thermophila: ANT_19590
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Entry
ANT_19590 CDS
T01410
Name
(GenBank) putative ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
atm
Anaerolinea thermophila
Brite
KEGG Orthology (KO) [BR:
atm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atm03016
]
ANT_19590
Enzymes [BR:
atm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ANT_19590
Transfer RNA biogenesis [BR:
atm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ANT_19590
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BAJ63985
UniProt:
E8N6C1
LinkDB
All DBs
Position
complement(2197415..2199241)
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AA seq
608 aa
AA seq
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MFMHSVQIGALVVFRQEPARVIRVGERWEIELASGEVQRVRPKDVVVLHPGPLQDFKELQ
KPASGDLQGAWQILTGMTTTLAELSELAFGAYTPQTAWEVWKNVMEGKFFKGTPEAIQVL
SEKEVKEKEEQERARQKAEEEWQAFLFRINQKLYVEQDVRYLKEIEQFACGLMKRSRALQ
DLKRAETPENAHQLLLEVGYWKETYNPYPRRFQVPLQVPVYPLPGLPEEPRKDLTHLLSF
AIDDAGSEVPDDAISFDEGRIWVHIADPAALILPDTQADREARARGESLHLPEGTVHMLS
EDAISKFGLGKQEISPALSIGICLSPSGEIQNVEIVPSRVRVSRLTYQNAEVLMDAPLFS
EIEKWLGFHREARLRHGAVELDLPEVRVKVDEHQKVEIQPVLSLRSRRMVEEAMLLAGTA
IAQWCIERNVPVPFTIQEAPEQRVSGDTLADMYAMRRWMKRSQYRSAPAEHAGLGLKFYV
QGTSPLRRYLDLVVHQQIRSFLRGEKLLSEQDILERIGEVEVLLPSLRQAEILSEKHWTL
VYLLQNPHWSGMAQVVDLRPSGVVVLIPELAWETTLPSSHGLVKNQPVKVECVDVNLPRL
EAHFRLLP
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgtttatgcattctgtccaaataggcgccttggttgtatttcggcaagaacctgccaga
gtcatccgggtgggtgagcgctgggagattgaattagccagtggggaagttcagcgtgtg
cgcccaaaggatgttgtggtgttgcatcccggtccccttcaggacttcaaagaattacaa
aaacctgcctctggggaccttcaaggtgcctggcagattctgactggaatgaccactacc
ctggcagaattatccgagttagcgtttggtgcatacactcctcaaacggcatgggaagtc
tggaagaacgtcatggagggaaagtttttcaagggaacccctgaggcaattcaagttctc
tcggaaaaagaggtgaaagaaaaggaagagcaagaaagggctcggcaaaaagccgaagag
gaatggcaagcctttctatttcgaataaatcagaaactctacgttgaacaggatgttcgt
tatctcaaagagattgaacaatttgcctgcgggctgatgaaacgttcaagagccttacag
gatttaaagcgggcagaaacgcccgaaaatgctcatcaacttttactggaagtgggttac
tggaaagaaacttacaatccgtatccccgtcggtttcaagttcctcttcaggtgcccgtt
taccctttgccggggcttccagaagagcctcggaaagatctgacgcatctcctttccttt
gctatcgacgatgcaggaagcgaagttcctgatgatgcgattagtttcgatgaaggaaga
atttgggttcatattgctgaccctgcggcattaattcttccagacacacaagccgatcgg
gaagcgcgagcacggggtgagtcacttcaccttcccgaaggcaccgtgcatatgctttcc
gaagatgccatctcaaaattcggtttggggaagcaggaaatctcccctgcactgtccatt
ggaatttgtttatccccaagtggagaaattcagaatgttgagatagtaccttctcgggtt
cgagtgtcacggttgacttatcagaatgcagaggttttgatggatgcccccctgttttca
gagattgaaaaatggcttgggtttcatagagaagcccgcttgagacatggggctgttgaa
ctggatttacctgaggtcagggtgaaagttgatgaacatcagaaagtagaaattcaaccg
gtcctatccttacgaagtcgtcggatggtagaagaagcaatgcttctggctggaactgcg
attgctcagtggtgtatagaaagaaatgtgcccgttccttttaccatccaggaagcacct
gagcagcgggtatcgggtgacactctggcagatatgtatgcgatgcgacgctggatgaaa
cgaagtcaatatcgatcggcaccagcagagcacgccggcctgggattaaagttctacgtt
caggggaccagcccgttaaggcgttatctggatttggtagtgcatcaacagatacggagt
tttctccgtggagagaaactgcttagcgagcaggacattctggagcgaattggagaagtg
gaggttctcttaccctctctccgccaggcagaaattctctccgaaaagcactggacgctg
gtgtatttgctccagaatcctcattggagtggaatggcacaggtagtggatttgcgccct
tccggggtggtggttttgattcctgaactggcatgggaaactacattgccctcttctcat
ggattggtgaagaatcaacctgtcaaggtggaatgcgttgacgtaaatctaccacgtctg
gaagcgcatttccgtttgttaccatga
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