Acinetobacter tandoii: FM020_01165
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Entry
FM020_01165 CDS
T06790
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
atn
Acinetobacter tandoii
Pathway
atn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FM020_01165 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atn03021
]
FM020_01165 (rpoA)
03400 DNA repair and recombination proteins [BR:
atn03400
]
FM020_01165 (rpoA)
Enzymes [BR:
atn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FM020_01165 (rpoA)
Transcription machinery [BR:
atn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FM020_01165 (rpoA)
DNA repair and recombination proteins [BR:
atn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FM020_01165 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QDK96598
LinkDB
All DBs
Position
241022..242029
Genome browser
AA seq
335 aa
AA seq
DB search
MTRTANEFLTPQAIKVEAVSGTSAKVILEPLERGFGHTLGNALRRILLSSLPGAAVVEVE
IEGVEHEYSTLEGLQQDIVELLLNLKGLSIKLFDQNEAYLTLEKQGPGDVTAADLRLPHN
VEVVNPEHLIGTLSATGSLKMRLKVAQGRGYETSDSRFPEGETRPVGRLQLDASYSPIKR
VSYIVENARVEQRTDLDKLIIDLETNGTVDPEEAIRKAATILQQQIAIFVDLQKDQAPVA
QEPREEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASKGLQLGMRLENWPPASLRMDDRFAYRSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtactgcaaatgagtttctaactccgcaagcgatcaaggtcgaagcggtaagc
gggacctcggcaaaagttattctagaaccattagagcgtggctttggtcatactcttggt
aatgctttacgtcgcatccttctttcttctttacctggcgcagctgtggttgaagttgaa
attgaaggtgtcgagcacgagtacagtaccttggaaggcttgcagcaggacatcgtcgag
ctcttgctgaacctgaaaggattgtctattaagctgttcgatcaaaatgaagcttatttg
acattagagaaacaaggtcctggcgacgtaactgctgctgaccttcgtttacctcataat
gttgaagtggttaaccctgaacacttgatcggtacattaagtgcaactggctcattaaaa
atgcgccttaaagttgctcaaggccgtggttatgaaacttctgattcacgtttcccagaa
ggcgaaactcgcccagtgggtcgtttacagttagatgcttcttatagcccaatcaaacgt
gtgtcttacatcgtagaaaatgcgcgtgtagaacaacgtactgaccttgataagctgatc
attgatcttgaaaccaatggtacagttgatcctgaagaagctatccgcaaagcggcaaca
atcttgcaacaacaaattgcaatttttgttgatcttcagaaagatcaagctcctgttgct
caagaacctcgtgaagaagttgacccaattttgcttcgtccagtagatgatctagagctt
actgttcgttctgcgaattgtttaaaagcagaaaatatttactacattggtgatcttgta
cagcgcactgaggttgagttgcttaaaactcctaaccttggtaagaaatcgcttactgag
atcaaagatgttctggcttctaaaggcttacaactcggcatgcgtttagagaactggcca
ccagctagtctccgtatggacgatcgtttcgcctatcgtagccgttaa
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