Acinetobacter tandoii: FM020_02035
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Entry
FM020_02035 CDS
T06790
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
atn
Acinetobacter tandoii
Brite
KEGG Orthology (KO) [BR:
atn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atn03009
]
FM020_02035 (rlmD)
Enzymes [BR:
atn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FM020_02035 (rlmD)
Ribosome biogenesis [BR:
atn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FM020_02035 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
PCMT
Methyltransf_25
Methyltr_RsmB-F
Ubie_methyltran
MTS
TRAM
TRM5-TYW2_MTfase
GCD14
Cons_hypoth95
Methyltransf_23
Methyltrans_SAM
Methyltransf_11
RrnaAD
CMAS
UPF0020
Methyltransf_15
FtsJ
Motif
Other DBs
NCBI-ProteinID:
QDK96749
LinkDB
All DBs
Position
416534..417925
Genome browser
AA seq
463 aa
AA seq
DB search
MKHRQHTRPSQQPIYTFQVETLSHEGRGIAHYGTDAAHPVEKHGKKVFIAQALPGETVRA
KITHSNKRLEEADCIEVLGTPSSLRVKPACPHFHVCGGCSLQHIEKDEQISFKQDVLKSH
LQHFAGLQPEEWLAPIRSLREDYRRKARIGVRYFPQRDQLIVGFREKQSNKLTSIDRCLV
LDQAFGSITRLKQLLQSLTAKAAIGHIELAMGDQEIALLIRHTEKLSDHDVNQLKQFTLQ
KQWQLYLQPAGPDSIQRVDQAQAEMRLHYALTDFDVNFSFSPLDFTQVNSTVNPQMVKLA
CELLQLQQGDRVLDLFCGLGNFSLPLARCVGPTGQVIAVEGSDEMVQRGQDNARRNTMTH
VEFFSQDLTKDFSHHSWAKQGFDALLIDPPRSGAEEVMHYVPKFNAKKIVYVSCNPATLA
RDAGVLAQHGYRLKKAGVMDMFTHTEHVESIALFEQEKEINDL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatcgtcagcatacccgtccaagtcagcaaccgatttatacttttcaggttgag
acactttcacatgaaggacgtggaattgcccactatggtacggatgccgcacaccctgtt
gaaaagcacggcaagaaagtctttattgctcaggcacttcctggggaaactgttcgtgcc
aaaattacgcatagcaataagcgcttggaagaggcggattgcatcgaagttttgggtacg
ccatcaagcttaagagtgaagcccgcttgtccgcattttcatgtctgcggaggttgtagt
ttgcaacatattgaaaaagacgagcagattagtttcaagcaggatgtgctgaaatcacat
ttacagcattttgcaggtttacagcctgaagaatggctggcaccgattcgttcattacga
gaagactaccgccgtaaagcgcgaataggcgtgcgctatttcccacagcgtgatcaattg
attgtggggtttcgtgaaaagcaaagtaataaactgacgtcgattgaccgttgtctggta
ctggatcaggcttttggttcaattacccgtttaaaacagttactccaaagtctaacagcc
aaagccgcgattgggcatatagaattggcaatgggggatcaggaaattgccttactgatt
cgccatacagaaaaattatcggaccatgatgtcaaccaattaaaacagtttacgttacag
aaacaatggcaattgtatttgcagcccgcaggtccagacagcatacaacgtgtggatcag
gcacaggctgaaatgcgtttacattatgctttaaccgactttgatgtgaattttagtttt
agtccactcgattttacgcaggtgaactcaactgtaaatccgcaaatggtcaagctggca
tgtgaattgcttcagctgcaacaaggtgatcgcgttttagatcttttttgtggacttggc
aacttctctttacccctcgcacgttgtgttggaccgacaggacaggtgattgcggtcgaa
ggaagtgatgaaatggttcaacgtgggcaagacaatgcacgtcgcaataccatgactcat
gttgagttcttttcacaagatttaacaaaagatttttcgcatcattcttgggcaaaacag
ggatttgatgcattattgatagaccctccgcgctctggtgcggaagaggtaatgcattat
gttcctaaatttaatgcaaaaaaaatcgtttatgtttcatgtaatccagcaacactggca
agggatgcgggtgttttggcacaacatggctatcgattaaaaaaggcgggtgtgatggat
atgtttacgcatactgaacatgtcgaatcaattgccttatttgagcaagaaaaagagata
aacgatttataa
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