Acinetobacter tandoii: FM020_09945
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Entry
FM020_09945 CDS
T06790
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
atn
Acinetobacter tandoii
Pathway
atn03030
DNA replication
atn03430
Mismatch repair
atn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FM020_09945 (dnaE)
03430 Mismatch repair
FM020_09945 (dnaE)
03440 Homologous recombination
FM020_09945 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atn03032
]
FM020_09945 (dnaE)
03400 DNA repair and recombination proteins [BR:
atn03400
]
FM020_09945 (dnaE)
Enzymes [BR:
atn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FM020_09945 (dnaE)
DNA replication proteins [BR:
atn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FM020_09945 (dnaE)
DNA repair and recombination proteins [BR:
atn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FM020_09945 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QDK98189
LinkDB
All DBs
Position
2085178..2088747
Genome browser
AA seq
1189 aa
AA seq
DB search
MHFVHLGIHTEFSITESIVRIPDLIKAAINDEMPALALTDLSNLHAAVKFYGSCQSKGIK
PILGSVIRLNDAEHRVTLLAMTNKGWRGLTEIVSRGFIEGQQLDIPCVQKDWVLEQHDDI
IALLGMQSDVGKMLCSSNPQKAEPLLEQWIEKFGNRVYLTLTRTDRPFEEDYIVEAVKLA
KKYNIGVVAHNDVHFITRDDFEAHEARVCIADGYVLGDDRRPKPYSPEQYFKTAAEMTEL
FSDLPTAIENSFHIARRCNVTLQLGKYFLPDYPIPEGHTIDTFFEHLSKEGLEERLNHLY
PVEQRGDDWAEIRKPYDDRITYEINIINSMGFPGYFLIVMDFIQWSKNNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDKVIDYVARNYGRD
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMIPTKPLGLSLEESIEAEPQLKDI
VTNPSNPDNDDASEIWEMALKLEGITRNTGKHAGGVVIAPTKITDFSAVLCDSDGTGRVA
QYDKDDVEAAGLVKFDFLGLRNLTVIEDAVQNINKHYPSEIPLDIANIPLDDKDAYLVFA
DANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLEGVLEPTYGIMVYQEQVMQAAQYCAGYTLGGADLLRRAMGKKKPEEMVKQRQIFIE
GASKKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYQTAWLKAHYPAEFLSAVMSS
EMQNTDNVVFLIDDCRNNNLDVLPPSVNMSLYHFHATDEKTIVYGLGAIKGVGEQAMQSV
IDSRLQDGPYKDLFDFCHRIDLKKINKRTLEALIRAGALDCLGIERSSLMAQLPEAVQAA
EQARSNRETGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRPE
LKSFIPAKINELTPTRRGVTTVFAGLVVDVANFPNRIMVTLDDGTSRIEVSANHERFQRF
KDIIVNERVVVIEGEIYEREGFDRPMGRLTKAFSLNEIRQKRANSIQIKLQTEHLSKTLS
QDLQKILLPYCNVDLCNHIPVLLQLDYAYATADLHLGMQWKVAPLDELLSKLRDYFGKEA
IYIEYQVKSKAAKAVSYEQAKPAQVPPPPADLSMDEAMDLYQAEANQYS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcactttgttcatcttggtattcataccgaattttcaattactgaatctatcgttcgg
atacctgatctaattaaagctgcgataaatgacgaaatgccagctttggctttgactgat
ttgtcgaatctgcatgcagccgtcaagttttacggctcttgtcagtccaaaggtattaaa
ccgattctaggttcagtcattcggctgaatgatgctgaacatcgcgtaaccttattggcc
atgaccaataaaggctggcgtggtctgacggaaattgtatcccgcggatttattgaaggt
cagcaactcgatatcccctgcgtgcaaaaagactgggtgctggaacagcatgatgacatt
attgccttgttgggcatgcaaagtgatgtcggtaaaatgctttgctcatccaatccgcaa
aaggcagaacccttactcgaacagtggatcgaaaaattcggtaatcgggtttaccttacc
ctcacccgtacggatcgcccttttgaagaagattatattgtcgaagcggtaaaactcgcc
aaaaaatataatattggcgtggtagcacataacgatgtgcactttattactcgtgacgat
tttgaagcacacgaagcgcgcgtctgtattgccgatggttatgtgcttggtgatgatcgt
cgtccaaagccttatagccctgaacaatattttaaaactgcggctgaaatgaccgagctg
ttttcagatttgccgactgccattgaaaacagtttccacattgcgcgacgttgtaatgtc
accctgcaactgggcaaatacttcctgcccgactacccaattcctgaaggtcatactatt
gataccttctttgagcatttatccaaagaaggtctggaagaacgcctgaaccacctctat
ccagtggaacaacgtggcgatgactgggctgaaatccgtaaaccatatgatgaccgtatt
acttacgaaattaacatcatcaactcgatggggttccctggctacttcctcattgtcatg
gacttcattcaatggtcgaaaaataatggcgtgcctgtaggtcctggacgtggttcgggt
gcaggttctctggtcgcgtatagcttaaaaattaccgacctcgacccactccgttacgac
ctgctctttgaacgtttcttaaacccagaacgtgtctcgatgcccgactttgacgttgac
ttctgtatcgcaggtcgcgataaagttattgactatgtagcacgcaactacggacgtgat
gcggtttcccagattgccaccttcggtaccatggcagcaaaaggtgccattcgtgacgtt
gcccgtgtactcggtaaatcttatggtttggcggatcgtatttccaaaatgattccgacc
aaacctttaggtttgtctttagaagaatcgatcgaagctgaaccccaactcaaagacatt
gtcaccaatccgtctaacccagacaacgacgatgcctctgaaatttgggaaatggcactc
aagttagaaggcattacccgtaatacaggtaagcatgcgggcggtgtagtgattgcacca
accaaaattaccgacttctctgcggtactttgtgattcagatggtacaggtcgtgtcgcg
caatatgataaagacgatgttgaagcggctggactggtcaagttcgacttcttgggtcta
cgcaacttaaccgttattgaagatgcagtgcaaaatattaataagcactacccgtctgag
atacctctggatattgccaacattccactggatgataaagacgcctacttggttttcgca
gatgctaataccactgcggtcttccagtttgaatccgtcggcatgaaaaaaatgctcaag
gaagctcgtccgagcaaatttgaggaaattattgccttcgtgtccttataccgtcctggt
ccgatggatctgattccagactttattcaccgtatgcatggtggtgaatttgagtaccta
catcctttacttgaaggcgtactcgaaccaacttacgggattatggtttatcaggaacag
gtaatgcaggctgcacagtattgtgcaggctatactctgggtggcgcggacttactgcgt
cgtgccatgggtaaaaagaaacctgaagaaatggtgaaacagcgccagatctttattgaa
ggtgcatcgaaaaaagacattgatgaagccacggccaaccatattttcgactatatggaa
aagttcgcaggttatggttttaacaaatcgcatgcggcggcatacgctttagttgcctat
caaaccgcatggttaaaagcgcattacccagctgaatttttgtctgcggtaatgtcatcg
gagatgcagaacaccgacaacgtggtgttcctaattgatgactgccgtaataataactta
gatgtgttaccaccatctgtgaatatgtcgctctatcatttccatgcgaccgatgaaaag
accattgtctatggcttaggagcgattaaaggcgtcggtgaacaggccatgcagtcggtg
attgactctcgcctgcaggatggtccgtataaagacctgtttgatttctgccaccgtatt
gatttgaagaaaatcaacaagcgtacccttgaagcgctgattcgtgcaggtgctttagat
tgcttaggcattgaacgttcaagcctcatggctcaattgccagaagcggttcaagctgcg
gaacaggcgcggagcaaccgtgaaacaggcatcatggatttatttggtgaagttgaagaa
gttcaacgtaagcctgccaagcctgtgaaaccttggtcagatgaagtgcgcctcaaaggt
gaaaaggatacccttggcttatatctaactggacatccaattgatgtgtatcgtcctgaa
ttaaaatccttcattcctgccaaaattaatgagctcaccccgacccgccgcggtgtgacc
actgtttttgctggactggtggtggatgttgccaacttcccgaaccgtattatggtcacg
ctagatgatgggacatcgcgtattgaagtatctgccaaccacgaacgcttccaacgcttt
aaagatattattgtcaatgaacgcgtggtggtgattgaaggtgaaatttacgagcgtgaa
ggttttgatcgtccgatgggacgcttgaccaaagcctttagcctgaatgaaattcgccaa
aaacgtgccaacagcattcaaatcaaattacagaccgagcatctaagcaaaaccttgagc
caagacttacaaaaaatcttgttgccgtattgtaatgtcgacctatgcaatcacatcccg
gtgttattgcaactggattatgcctacgccactgccgatttacatttaggcatgcagtgg
aaagtggcgcctttagatgagctactcagcaaattacgcgattattttggtaaagaagcc
atctatattgaatatcaggtcaagtcgaaagcggctaaagctgtcagttatgaacaggct
aaacctgcccaagtaccccctccacctgccgatttgagcatggatgaggcaatggattta
tatcaagctgaagcgaaccagtactcttaa
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