KEGG   Acetobacter tropicalis: CIW82_01350
Entry
CIW82_01350       CDS       T05181                                 
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
ato  Acetobacter tropicalis
Pathway
ato03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ato00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CIW82_01350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ato03400]
    CIW82_01350
DNA repair and recombination proteins [BR:ato03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CIW82_01350
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CIW82_01350
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA_30 UB2H WHD_4th_Lhr AAA_22 SWI2_SNF2 DUF87 Kinesin AAA_5 Microtub_bd SRP54
Other DBs
NCBI-ProteinID: ATJ89557
UniProt: A0A0C9LJ79
LinkDB
Position
complement(298843..301110)
AA seq 755 aa
MATQSASRSSSSAARGKKRPSLSEKAAALPPVLFKPEKQAARPKLKRMEVVSEYEPAGDQ
PQAIKELVKGVEANERDQVLLGVTGSGKTFTMAKMIEATQKPTLILAPNKTLAAQLYGEM
KQFFPNNAVEYFVSYYDYYQPEAYVPRSDTYIEKDSQINEQIDRMRHAATQALLERNDVI
IVASVSCIYGIGSVETYSRMVVKLELGGEIDRDRLVRGLVELQYRRNDAAFTRGTFRVRG
ETIDVFPVQNEDRAWRISLFGDEIDGIIEFDPLTGEKTADLQEVTIYANSHYVTPRPTLN
QAIKGIKQELREQLDRFTQQGKLLEAERLDQRTTFDLEMLETTGVCKGIENYSRYLSGRE
PGDPPPTLFEYLPEDALLIVDESHVTVPQIGGMERGDNARKSTLAEFGFRLPSCLDNRPL
NFAEWDTFRPQTVFVSATPGPWEMERTGGVFAEQVIRPTGLIDPVTDIRPVEHQVDDLLA
ECRLTIAKGGRVLVTTLTKRMAEDLTDYLNEAGIRVRYLHSDVDTLERIEIIRDLRVGAF
DVLIGINLLREGLDIPECSLVAILDADKEGFLRSRTSLIQTIGRAARNVEGRVLLYADKM
TDSLRYAVEETARRREKQMAWNEAHGITPQSVRKNISDIVSSVFEQDYVTIAPDEDTGVT
EFVGQDLDAAIAGLEKRMREAAANLEFETAARLRDEIKRLEALQLGIEPPPQPTSTAGKK
PAGRRKKQDQVPRPLGPGGGGYDPKPKKGRTRSRG
NT seq 2268 nt   +upstreamnt  +downstreamnt
atggccacacagtctgcatcccgttcctcttcctccgcagcgcggggcaagaagcgtccc
tccctgagcgaaaaggcagccgcactgccgcccgtgctgttcaagccggaaaaacaggcg
gctcggcccaagctcaagcggatggaagtggtttccgaatatgaacccgccggggatcag
ccacaggccatcaaggaactggtgaagggcgttgaggccaatgagcgggatcaggtgctg
ctgggggttacgggctccggcaagaccttcaccatggccaagatgattgaggccacccag
aagccaaccctcattctggctcccaacaagacattggccgcacagctttatggggaaatg
aagcaatttttcccgaataatgcggtcgaatattttgtcagttactatgattattatcag
ccggaagcttatgtgccacggtctgacacctatattgaaaaagatagtcagatcaatgaa
cagatagaccggatgcgccacgccgccacgcaggcgctgctggagcggaatgacgtgatc
attgttgcgtccgtttcctgcatttacggtatcgggtcggtcgaaacctactcccgcatg
gtggtaaagctggaattgggtggcgagattgatcgggaccgattggtgcgcggtctggtg
gaactgcaataccgccggaatgatgccgcgtttacccgtggcacgttccgcgtgcggggt
gagaccattgacgtctttccggtgcagaatgaagaccgcgcctggcgcatttccctgttt
ggtgatgaaattgacggcattatcgagtttgaccctttaacaggggaaaaaacggcagat
ctgcaggaagtcaccatttacgccaacagccactatgtgacacctcggcccacgctcaat
caggctatcaaaggcatcaagcaggaactgcgcgaacagcttgatcgtttcacgcagcag
ggaaaactgctggaagcagaacggctggatcaacgcaccacctttgatctggaaatgctg
gaaaccacaggtgtgtgcaaagggattgaaaactattcccgttacctgtctggccgtgag
ccgggtgatccaccgccaaccctgtttgaatatctgcctgaagatgctttgctgattgtg
gatgaaagccatgtgaccgtgcctcaaattggtggcatggagcgcggggataacgcgcgt
aaatccaccttggcggagttcggcttccgtctgccctcctgccttgataaccggcctctc
aattttgcagagtgggatactttccgtccgcagaccgtgtttgtcagcgccacccccggc
ccgtgggaaatggaacgtaccggcggtgtatttgccgagcaggttatccgtccgacgggg
ctgattgaccctgttacggatatccgtccggttgagcatcaggtggatgatcttctggca
gaatgtcgtctgaccattgccaaaggcggccgtgttctggtgacaacgcttaccaaacgc
atggcggaagatctgacggattatctgaatgaagccggtatccgtgttcgctatctgcat
tcggatgtcgatacgcttgaacggattgaaattattcgggatctgcgcgtaggggcgttt
gatgttctgatcgggatcaaccttctgcgtgaggggctggatatcccggaatgttcgctg
gtggctattctggatgcggataaggaaggcttcctgcggtctcgcacctcactgatccag
accattggtcgtgctgcccgtaacgtggaaggcagggtgttgctgtacgccgataaaatg
acggattccctccgttatgcggtggaagaaacagcccgcaggcgtgaaaagcagatggct
tggaatgaagcgcacggcattaccccgcaaagcgtgcgcaagaatatcagtgatattgtt
tcttctgtctttgagcaggattacgtcaccatcgccccggatgaagatacgggtgtgacg
gaatttgtcgggcaggatcttgatgccgctattgctggccttgaaaagcgcatgcgtgag
gcagccgccaatctggaatttgaaacagcagcgcgcctgcgtgatgaaatcaaacggctg
gaagcgctgcaactggggatagagcctcctccgcagccaacatctacggccgggaaaaag
ccagccgggcggcgcaaaaagcaggatcaggttccgcgtcccctcgggccaggcggggga
gggtacgaccctaaacccaaaaaaggccgcactcgaagccggggttag

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