Acetobacter tropicalis: CIW82_02520
Help
Entry
CIW82_02520 CDS
T05181
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ato
Acetobacter tropicalis
Pathway
ato03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ato00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIW82_02520 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ato03021
]
CIW82_02520 (rho)
03019 Messenger RNA biogenesis [BR:
ato03019
]
CIW82_02520 (rho)
Transcription machinery [BR:
ato03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CIW82_02520 (rho)
Messenger RNA biogenesis [BR:
ato03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CIW82_02520 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
OB_RNB
AAA_22
AAA
Fungal_virus_P2_C
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ATJ89737
UniProt:
A0A291PEE1
LinkDB
All DBs
Position
552191..553486
Genome browser
AA seq
431 aa
AA seq
DB search
MHLAELKAKSPADLLACAEDLNIENASSLRKQDMMFAILKALADNDQAIYGDGTLEILHD
GFGYLRSPESNYLPGPDDIYISPTQVRRFGLRTGDTVEGQIRAPRDGERYFSLLKINSIN
FEPPEAVRHRINFDNLTPLYPERRLQMEVENQAPAVSETKGKKGKSTQDFTPRVIDLVAP
IGMGQRALIVAPPRTGKTVMLQSIASSISANHPECFLIVLLIDERPEEVTDMARSVRGEV
ISSTFDEPAHRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTG
GVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELILDR
KLADKRTFPAIDITKSGTRKEEMLVDRATLSKMWVLRRILAPMGTMDAMDFLLDKLKYSK
SNNDFFEAMNN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttgcggaactcaaggccaaatcaccggccgatcttttagcctgcgccgaagac
ctgaatatcgaaaacgcatcgtctctgcgcaaacaggacatgatgttcgccatcctgaaa
gccttggccgataacgaccaggccatatacggcgacggcacgctcgagatcctgcatgac
gggttcggttatctccgctcccccgaatcaaactaccttcccggcccggatgacatttac
atctcccccacccaggtgcgccgctttggcctgcggacaggggatacggttgaaggccag
atccgcgccccacgtgatggcgagcgctatttctctcttctgaaaatcaacagcatcaat
tttgaaccgccggaggccgtacgccaccgcatcaattttgataacctgaccccgctttac
cctgagcgccgcctccagatggaagtggaaaaccaggctccggccgtaagcgaaaccaag
ggtaaaaaaggcaagagcacgcaggatttcacgccgcgcgtgattgatcttgttgccccc
atcggcatgggccagcgcgccctgattgtggcgccgccgcgcaccggtaaaacggtcatg
ctgcagagcattgcctcctccatcagcgccaaccatccggaatgcttcctgattgtgctg
ctgattgacgaacgcccggaagaagtgaccgacatggcccgctctgtgcggggtgaagtg
atttcttccacctttgatgaaccagcccaccgccacgtgcaggtcacggaaatggtgctg
gaaaaggccaagcgtctggtggaacacaagcgcgatgttgtgatcctgctggattccatc
acgcgtctggcccgtgcctacaacaccgttgtgccatcatccggcaaggtgctgaccggt
ggtgtggacgccaatgcgctgcagcggcccaagcgcttctttggtgcagcccgtaacatt
gaagaaggtgggtcactcaccatcatcgctacagcgctgattgataccggcagccgcatg
gatgaagtgatctttgaagaattcaaaggcaccggcaactccgaactcatccttgaccgc
aagctggctgacaagcgcaccttcccggccattgacatcaccaagagtggcacccgtaag
gaagaaatgctggttgaccgcgccaccctgtccaaaatgtgggtactgcgccgtattctg
gcacccatgggcaccatggacgccatggacttcctgctggacaagctgaaatacagcaaa
tccaacaatgacttctttgaagccatgaacaactga
DBGET
integrated database retrieval system
