Acetobacter tropicalis: CIW82_16070
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Entry
CIW82_16070 CDS
T05181
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ato
Acetobacter tropicalis
Brite
KEGG Orthology (KO) [BR:
ato00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ato03009
]
CIW82_16070
Enzymes [BR:
ato01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CIW82_16070
Ribosome biogenesis [BR:
ato03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CIW82_16070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
ATJ92728
UniProt:
A0A291PMU0
LinkDB
All DBs
Position
3499652..3500932
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AA seq
426 aa
AA seq
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MRSLGAQGDGVASLPDGSAVHVPYTLPGELVRLTQDKGGRWTLKEILTQSPDRVDPPCSL
FGNCGGCTLQHMALPALLAWKSERVNAALKKAGFQTLPIAEQHQVKSHSRRRADLAIRRN
GKDILLGLHARNSHAVVDLTECSVLHPTVVSALPAFRQVLRSLEGLRQAGDLHINLLESG
MDVLLATDGPLSTGDRTRLAAFADSLSIPRISWRSVSSNAEPENVAQRGSVRHSFGSATV
APPAGTFLQATAESEAWIQESVIAALPKKLGKRDTLIELYAGCGTLSFPLASRARVLAYE
GHAAAASCLQAATGGTRVTAECRDLNRRPIMGKTLNTAAAVVLDPPHAGAKLQMAQIAAG
KPKSVVYVSCNPAALAKDATVLFSAGYSLSSISVIDQFLWSAEVEAVCGFTHESSRRSRS
GLSRSG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
attcggtctctgggggctcagggggatggggttgcctctctgcccgatggcagcgcggtg
catgtgccctataccctgccgggagaactggttcgtctgacgcaggataaggggggtcgc
tggacactcaaagaaatcctgacgcagtctcctgaccgtgttgacccaccctgctctctt
tttggcaattgtggggggtgtacacttcagcatatggcacttcctgccttgctggcatgg
aagagtgagcgtgttaacgccgcgttaaaaaaagccggcttccaaacgcttcccatagca
gaacagcatcaggtgaaatcccattcccgacggcgagctgatctggccatccgccggaat
gggaaggatattcttctgggccttcatgcgcgcaatagccacgccgtggtggatttgacc
gagtgctccgtgctgcatccaacagtggtgagcgcccttcctgctttccgtcaggtgctg
cgtagccttgagggcttgcggcaggccggagatctgcacatcaatcttctagaatcggga
atggacgtgcttctcgccactgatgggccgctttctacaggcgatcgaacccggctggcg
gcatttgccgattcgctttccatcccccgcatcagttggcggtccgtatcaagcaatgcg
gaacctgaaaacgtggcccaacgcggtagcgtgcgccacagttttggctcagcaacggtt
gctcctcctgccggtacctttctacaggccaccgcagagagtgaggcatggattcaggag
agcgtaatagcggctcttcccaaaaaattgggtaaacgcgatactcttattgagctgtat
gcagggtgtggaacgctcagctttcccttagccagtcgtgcacgcgtcctcgcctatgag
gggcacgcggcggcggcctcatgcctgcaagcagccacaggcggcacacgcgtgactgcg
gaatgtcgggatctgaaccggcggcccatcatggggaaaacgctcaacacggccgcagcc
gttgtgctggacccaccccacgctggcgccaaattgcaaatggcacaaattgccgcaggc
aagcccaaatccgttgtctatgtaagctgtaacccagccgcactggcaaaagatgcaaca
gtgttattttccgccggttacagcttgagcagcatcagtgtgattgatcagtttttatgg
tcagccgaggtggaagccgtatgcggcttcacacatgaaagctctcgccgcagccgcagc
ggcctttctcgttcgggttga
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