Aliarcobacter trophiarum: ATR_0003 Help Entry ATR_0003          CDS       T06356                                  Symbol gyrB Name (GenBank) DNA gyrase, subunit B   KO K02470   DNA gyrase subunit B [EC:5.6.2.2] Organism atp  Aliarcobacter trophiarum Brite KEGG Orthology (KO) [BR:atp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:atp03032]     ATR_0003 (gyrB)    03400 DNA repair and recombination proteins [BR:atp03400]     ATR_0003 (gyrB) Enzymes [BR:atp01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.2  DNA topoisomerase (ATP-hydrolysing)      ATR_0003 (gyrB) DNA replication proteins [BR:atp03032]  Prokaryotic type   DNA Topoisomerases    ATR_0003 (gyrB) DNA repair and recombination proteins [BR:atp03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHIIR (short-homology-independent illegitimate recombination)      Facilitator       ATR_0003 (gyrB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 DALR_1 Motif Other DBs NCBI-ProteinID:  AXK47898 UniProt:  A0AAD0VL40 LinkDB All DBs Position 2541..4856 Genome browser AA seq 771 aa AA seqDB search MSDYGASNIKVLKGLEAVRKRPGMYIGDTNINGLHHLIYEVVDNSIDEAMAGFCKNIKVT LTKDGWAKIEDDGRGIPVGIHPTEGVSAATIALTVLHAGGKFDKDTYKVSGGLHGVGVSV VNALSKHLKMTIYREGKIHFQEFKEGIPVAPLEVIGDSPRKTGTVIEFLVDDSIFEVTQY EFNILKKRFKEVAYLNPIISITLEDEAHKLKEVYHFEGGIKQFVADMNKETALCDVMHFS DKVDGVEVDIALMYNDTYIEKTLSFVNNIRTIDGGTHEAGFKAGLTRSISKYLSENAAAR EKDVKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIAQKLTGDNLDKYFEEN PTQARMVMEKSLMAARGREAAKKARELTRKKDSMSIGTLPGKLADCQSKDPTIKELYLVE GDSAGGSAKQGRDRVYQAILPLKGKILNVEKSRLDKILKSDEIRNIITALGCGIGEDFDE EKVRYHKIIVMTDADVDGSHIQTLLLTFFFRFLKPIVEKGYLYIAQPPLYRYKKGKNEIY LKDNNALSSYLIENGLENFEFEGMGYNDLLDLFKQVARYRSMLEQLAKRYSLLEVLKYLI ENSDLVNLEYSALYEKVKDFILEKGHNILSKTITEEKIQLFVQTKEGLEELIIDDELFAS PYFSQATFIYNKLKERDLTLFDGKDLIELLEEIENLAKKGAYIQRYKGLGEMNPEQLWET TMTPENRRLLRVKIEDAEAASDTFTLFMGDEVEPRRNYIESHAKDVEHLDV NT seq 2316 nt NT seq  +upstreamnt  +downstreamnt atgtcagattatggtgctagtaatattaaagttttaaaaggtcttgaagcagttagaaaa agaccaggaatgtatattggtgatacaaatataaatggacttcaccacttaatctatgaa gttgtagataactcaatagatgaagcaatggcaggattttgtaaaaatataaaagtaact cttacaaaagatggttgggcaaaaattgaagatgatggaagaggaattcctgttggaatt catccaactgaaggagttagtgcagcaactattgctcttacagttttacatgctggtgga aaatttgataaagatacatataaagtttcaggtggacttcatggagttggggtttcagtt gtaaatgcactatcaaaacatcttaaaatgactatttatagagaaggaaaaatacatttt caagagtttaaagagggaattcctgtagctccacttgaagttataggagatagtcctaga aaaactggaactgtaatagaatttttagtagatgattcaatttttgaagttactcaatat gaatttaatattcttaaaaaaagatttaaagaggttgcttatttaaatccaataatctct attacacttgaagatgaagcacataaactaaaagaggtttaccattttgaaggtggaatt aaacagtttgttgcagatatgaataaagagacagcactttgtgatgttatgcattttagt gataaagttgatggtgtagaagtagatattgctttaatgtataacgatacatatattgaa aaaactctaagttttgtaaataatatacgaacaatagatggtggaacacatgaagcgggg tttaaagcaggacttacaagatctatttcaaaatatttaagtgaaaatgcagcagcacgg gaaaaagatgtaaaaataacaggagatgatgtaagagaagggcttattgcagttgtttct gtaaaagttcctgaaccacaatttgaaggtcaaacaaaaggaaaattaggaagctcttat gtaagaccaattgcacaaaaattaactggtgataatctagataaatattttgaagagaat cctacacaagcaagaatggttatggaaaaatctcttatggcagcaagaggaagagaagct gctaaaaaagcaagagaattaactagaaaaaaagattctatgagtataggaacacttcca ggtaaattagcagattgtcaaagtaaagatccaacaataaaagagttatatctagtggag ggtgattctgcaggaggttcagcaaaacaaggaagagatagagtttatcaagcaatttta cctctaaaaggaaagattttaaatgttgaaaaatcaagacttgataaaattttaaaatct gatgagattagaaatattattactgcacttggatgtggaattggtgaagattttgatgaa gagaaagtaagataccataaaataattgttatgaccgatgccgatgtagatggtagccat attcaaactctgcttcttacatttttctttagatttttaaaaccaatagttgaaaaaggt tatttatatatagctcaaccaccactttatagatataaaaaaggtaaaaatgagatatat ttaaaagataataatgctttaagttcatatttaattgaaaatggtttagaaaattttgag tttgaaggtatgggatataatgatttacttgatttatttaaacaagtagctcgttataga tcgatgttagagcaattagcaaaaagatactctttacttgaagtattaaaatatttaata gaaaatagtgatttagtaaatcttgaatatagcgctttatatgaaaaagttaaagatttt attttagaaaaaggtcataatatcttatcaaaaactataacagaggaaaaaattcaacta tttgtacaaacaaaagagggattagaagagttgattattgatgatgaactttttgcttct ccatactttagtcaagctacatttatttataataaactaaaagagagagatttaactctt tttgatggaaaagatttaattgagcttcttgaagagatagaaaatcttgcaaaaaaaggt gcatatattcaaagatataaaggtttaggagagatgaatcctgaacaactttgggaaaca acaatgactccagaaaatagaagacttttaagagtaaaaatagaagatgctgaggctgct agtgatacatttactctatttatgggtgatgaagtagaaccaagaagaaactatatagaa tcacatgctaaagatgtagaacatcttgatgtataa

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