Aliarcobacter trophiarum: ATR_0166
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Entry
ATR_0166 CDS
T06356
Name
(GenBank) radical SAM methylthiotransferase, MiaB/RimO family
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
atp
Aliarcobacter trophiarum
Brite
KEGG Orthology (KO) [BR:
atp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atp03009
]
ATR_0166
Enzymes [BR:
atp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ATR_0166
Ribosome biogenesis [BR:
atp03009
]
Prokaryotic type
ribosomal protein modification factors
ATR_0166
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AXK48059
UniProt:
A0AAD0QHR9
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All DBs
Position
complement(158445..159785)
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AA seq
446 aa
AA seq
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MKFSEEKPKKKLHMVSLGCTKNLVDSEVMLGKLKDYELTDDESQADLIIVNTCGFIDSAK
EESINTTLNLHNERKKESVLVMAGCLSERYKEDLQKELTEIDIFTGVGDYDKIDKLVHEK
RSSFSNEVFLASEENDRVITGSNYHAYVKLSEGCNQTCSFCAIPSFKGKLHSRTLESLIK
EVKNLVNNGYKDFSFVSQDSSSYLRDLGQNDGLEQLIEAVEKIEGVKTARILYLYPSTTT
HNLIDKIANSKIFVNYFDMPLQHISQNMLKIMKRGKGAEKLIELMQYMKSKPNSFVRTTF
IAGHPGESEDDFEELCSYVESFGFDRANVFSYSDEEGTLAETRDDKIEQDLVDERAEILG
DIISKTTTNSLENDIGKTFEVYIDGESDEHEYLLSARKTLWAPQIDGEIYINDNELEEQI
IFGEIYEVIATELAGDKLLAKVLRKI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagtgaagaaaaaccaaaaaagaaactacatatggtaagccttggctgtaca
aagaatttagttgatagtgaagtaatgttgggaaaacttaaagattatgaactaacagat
gatgagtcacaagctgatttaataatagtaaatacttgtggttttattgatagtgcaaaa
gaagagagtataaacacaactttaaatctacataatgagagaaagaaagagtctgttttg
gttatggctggatgtttaagtgaaagatataaagaggatttacaaaaagagcttactgaa
attgatatttttacaggagttggagattacgataaaatcgataaacttgtacatgaaaaa
agaagtagtttttcaaatgaggtttttttagcaagtgaagagaacgatagagtaataaca
ggttcaaattatcatgcttatgtaaaattaagtgaagggtgtaatcaaacttgctcattt
tgtgcaattccatcttttaaaggaaaacttcactcaagaactttagaatcacttataaaa
gaggttaaaaatctagtaaataatgggtataaagatttctcttttgtatctcaagattca
tcatcttatttgcgagatttagggcaaaacgatggattagaacagttaattgaagcagtt
gaaaaaatagaaggtgtaaaaactgcaagaattttatatctatatcctagtacaacaaca
cataatcttatagataagattgcaaactctaaaatctttgtaaactattttgatatgcca
cttcaacatatctcacaaaatatgctaaaaattatgaaaagaggaaaaggtgctgaaaaa
ctaattgaactaatgcaatatatgaaatctaaacctaactcttttgtaagaacaactttt
atagctggacatccaggagaaagcgaagatgattttgaagagctttgctcttatgtagaa
agttttggttttgatagagcaaatgttttttcatactctgatgaagaaggaactcttgct
gaaactagagatgataaaatagaacaagatttagtagatgaaagagcagagattttagga
gatattatctcaaaaacaactacaaactctttagaaaatgatattgggaaaacttttgaa
gtgtatatagatggagagagtgacgaacatgagtatcttttaagtgctaggaaaactctt
tgggcaccacaaattgatggagaaatttatataaacgacaatgaacttgaagagcaaata
atctttggtgagatctatgaagtaattgctacagagcttgcaggtgacaaacttctagca
aaagtattaagaaaaatataa
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