Aliarcobacter trophiarum: ATR_0319
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Entry
ATR_0319 CDS
T06356
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
atp
Aliarcobacter trophiarum
Brite
KEGG Orthology (KO) [BR:
atp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atp03016
]
ATR_0319 (truB)
Enzymes [BR:
atp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ATR_0319 (truB)
Transfer RNA biogenesis [BR:
atp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ATR_0319 (truB)
Prokaryotic type
ATR_0319 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
SNaCT11
Motif
Other DBs
NCBI-ProteinID:
AXK48204
UniProt:
A0AAD0QHS7
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Position
293607..294473
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AA seq
288 aa
AA seq
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MQKRVYEKGELNKLFVVKKPMFISSNFYLNKFKRAYKNKKAGFSGTLDPFAKGCLIVAFG
QYAKLFKYLEKTPKVYKAVIWLGVSSDSLDIERINSIGFEKELNIDFVKKEIEKLKGNIE
YIPPKFSAKRVNGQKAYEIAREGLDFELESSIMQIFDIKFIRYNHPFISFEVKVSEGSYI
RSLAQIFLRNIGSIGTLSYLERVCEGKFRFENHKELNPMDFIDLPKNNYTGTKEWLEFGR
RISKDYLDIKDNGKYIIEVDTFFSIIEIIDNEVKYLLNKVPKIEVKND
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaaagagtttatgaaaaaggcgagttaaataaactatttgttgtaaaaaaacct
atgtttattagctcaaatttttatttaaataagtttaaaagagcttataaaaataaaaag
gctggatttagtggaactttagacccatttgcaaaagggtgtttgatagttgcttttgga
caatatgcaaagctttttaaatatttagaaaaaacaccaaaggtctataaagctgttatt
tggttaggtgttagttcagactctttagatattgaaagaattaatagtatagggtttgaa
aaagaattaaatattgattttgtaaaaaaagagatagaaaagttaaaaggtaacatagag
tatattccaccaaaattttcagcaaaaagagtaaatgggcaaaaagcttatgagattgct
agagaaggtttggattttgaattagaaagttcaattatgcaaatatttgatataaagttt
attagatataatcacccttttatcagttttgaagtaaaagttagtgaaggttcatatatt
cgctctcttgcccaaatatttttaagaaatattggttccattggaactttgagttatctt
gaaagagtttgtgagggaaaatttagatttgaaaaccacaaagagttaaatcctatggat
tttatagatttaccaaaaaataactatactggaacaaaagagtggctagagtttggtaga
agaataagtaaagattatttagacattaaagataatggaaaatatattattgaagtagat
acttttttttcaattatagagataattgataatgaagtaaaatatctgttaaacaaagtt
ccaaaaatagaggttaaaaatgactaa
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