Aliarcobacter trophiarum: ATR_0685
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Entry
ATR_0685 CDS
T06356
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
atp
Aliarcobacter trophiarum
Pathway
atp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
atp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATR_0685 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atp03400
]
ATR_0685 (uvrB)
DNA repair and recombination proteins [BR:
atp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATR_0685 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ATR_0685 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
SWI2_SNF2
AAA_30
T2SSE
AAA_22
SRP54
Viral_helicase1
AAA_7
DUF87
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AXK48554
UniProt:
A0AAD0QIV3
LinkDB
All DBs
Position
complement(655612..657585)
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AA seq
657 aa
AA seq
DB search
MAKFEVVSDYSPSGDQPKAIKALVESIEAKNQYSTLLGVTGSGKTYTIAKVIEKVQKPTL
IMTHNKTLAAQLYSEFKQFFPNNHVEYFISYYDYYQPEAYIPRSDLFIEKDSSINEELER
LRLSTTASLLSFDDVIVIASVSANYGLGNPSEYKAMVQRVEVGFSYSQREFLLKLIEMGY
KRNDKFFDRADFRVNGDVIDIFPAYYEDEFIRVEFFGDEVETISKHEYLTNERVKDLKEI
IIYSVNPFVVTQDNLARAVKEIEEELENRLNYYQKEQKLVEYQRLKQRVEFDLEMIEATG
MCKGIENYARHLTGLKPGETPYSLLDYFAQMDKDFLLVVDESHVSLSQFRGMHVADRSRK
EVLVEYGFRLPSALDNRPLKFDEFIKKAPNYIFVSATPNELELELSPVVAEQIIRPTGLL
DPIIEIMDSEFQVEKLHDEIKKVVTKNQRVLVTVLTKKMAEELASYYADLGIKVKYMHSE
IDAIERNQIIRELRLGTFDVLIGINLLREGLDIPETSLVAILDADKEGFLRSRTSLIQTI
GRAARNEEGRVILFAKKITASMQFAIDETNRRRELQEAHNKEFNITPKSTTRKLEDSLKL
EEYDTVALKKQRLEKMPASERKKILIELNKQMKKAASDLNFEEAIRLRDEIAKIKEI
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaatttgaagtagtaagcgattatagtccaagtggagatcagccaaaagctata
aaagctctagtagaaagtattgaagcaaaaaatcaatatagcacacttttaggagttact
ggaagtggaaaaacttatactattgcaaaagtaatagagaaagtgcaaaaaccaacttta
ataatgactcataataaaactttagcagctcaactatatagcgaatttaagcaatttttt
ccaaataatcatgtggagtattttatctcatactatgactattatcaacctgaagcttat
attccaagaagtgatctatttattgaaaaagatagctctataaatgaagaactggaaaga
ctaagactaagtacaacagcctctcttttgtcttttgatgatgtaatagttattgcatct
gtatctgcaaactatggtttgggaaatcctagtgagtataaagcgatggtacaaagagta
gaagtaggtttttcatactctcaaagagagttcttattaaaactaatagagatgggttat
aaaagaaatgataaattctttgatagagctgattttagagtaaatggcgatgtaattgat
atatttccagcatattatgaagatgagtttattagagttgagttttttggagatgaagtt
gaaactatatcaaaacacgagtatttaacaaatgagagagtaaaagacttaaaagagata
attatctattcagttaatccttttgttgtaacacaagataatctagcacgagcagttaaa
gagatagaagaagagctcgaaaatagattaaattactatcaaaaagagcaaaagctagta
gagtatcaaagacttaaacaaagagtagagtttgatttagagatgattgaagcaactgga
atgtgcaaaggaattgagaattatgcaagacatttaacaggtttaaaacctggggaaaca
ccttattctcttttggattattttgctcaaatggacaaagattttttactagttgttgat
gaatcacatgtatctctaagccaatttagaggaatgcatgtagctgatagaagtagaaaa
gaggttttagttgagtatgggtttagacttccaagtgcattagataatagacctttaaaa
tttgatgagtttataaaaaaagccccaaactatatatttgtaagtgcaactccaaatgag
ctagaattagaattgagtccagttgtagcagagcaaataatacgaccaactggtctttta
gacccaattattgaaataatggatagtgaatttcaagtagaaaaactacatgatgagata
aaaaaagtagttacaaaaaaccaaagggtactagttactgttttaacaaaaaaaatggca
gaagagttagctagttattatgctgatttaggaataaaagtaaaatatatgcatagcgaa
atagatgctatagagagaaatcaaataataagagagctaagactaggaacttttgatgtc
ttaattggaataaatttactaagagaaggtttagatattccagaaacttcacttgttgca
attttagatgcagataaagagggatttttaagaagtcgtacttcacttattcaaactatt
ggaagagctgctagaaatgaagaaggaagagttatcttatttgcaaaaaagataacagcc
tctatgcaatttgcaatagatgagacaaatagaagaagagagcttcaagaagcacataat
aaagagtttaatataactccaaaatcaacaacaagaaaactagaagatagcctaaaactt
gaagagtatgacacagttgctctaaaaaaacagcgacttgaaaaaatgccagcatctgag
cgaaaaaaaatcttaattgaactaaataaacagatgaaaaaagctgcaagtgatttgaac
tttgaagaagctataagactaagagatgagatagcaaagattaaagagatataa
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