Aliarcobacter trophiarum: ATR_0836
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Entry
ATR_0836 CDS
T06356
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
atp
Aliarcobacter trophiarum
Pathway
atp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ATR_0836 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atp03021
]
ATR_0836 (rpoA)
03400 DNA repair and recombination proteins [BR:
atp03400
]
ATR_0836 (rpoA)
Enzymes [BR:
atp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ATR_0836 (rpoA)
Transcription machinery [BR:
atp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ATR_0836 (rpoA)
DNA repair and recombination proteins [BR:
atp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ATR_0836 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AXK48704
UniProt:
A0AAD0QJ67
LinkDB
All DBs
Position
792152..793150
Genome browser
AA seq
332 aa
AA seq
DB search
MKKFAETPFLPTEVEIEAISANEAKITAYPFEDGFAITLAHPLRRLLLSSSVGYAPIAVK
IESVTHEFDSLRGMLEDVAMFVINLKNMRFKINGDKNQVSVEYSFSGPRDIKGSDLINSE
VDVVSTDEHLATINSDCNLNFTVIIQKGIGYMPSEDIRDIVGPDFIPIDAFFTPVKKVVY
NIEKMLVEDNPNYEKAVFNVVTNGQISPITAFKEAVSVMYSQMSVFNKVFDLSEVSINDS
SDDSVELKDLIVKIEDLNLTARSYNALDRNGIKYLGELVLMSEVEVKNIKNLGTKSYNEI
AEKLESLGYPVENTLPENIASSLRRKLEQLKA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttgcagaaactccgtttttaccaactgaagttgaaattgaagctattagt
gctaatgaagcaaaaattacagcttatccatttgaagatggatttgctataactttggct
catccgttaagaagattacttttaagttcatctgttggctatgcaccaatcgctgttaaa
attgaaagtgttactcatgaatttgattcattaagaggaatgcttgaagatgttgctatg
tttgttattaatcttaaaaatatgagatttaaaataaatggtgataaaaatcaagtttct
gttgagtactcttttagtggaccaagagatattaaaggtagtgatttaataaattctgaa
gttgatgtagtatcaactgatgaacacttagcaactatcaatagtgactgtaacttgaac
tttacagttattattcaaaaaggtattggatatatgccttctgaagacattagagatatt
gtaggacctgattttataccaatagatgctttttttacaccagttaaaaaagtggtttat
aatattgaaaagatgttagttgaagacaatccaaactatgaaaaagctgtatttaatgta
gttacaaatggacaaattagtccaatcactgcatttaaagaagcagttagtgttatgtat
tcgcaaatgtcagtatttaataaagtttttgatttatcagaggtatcaattaatgattcg
agtgatgatagtgttgaattaaaagatttaattgtaaaaattgaagatttaaacttaact
gctagaagttataatgctttggatagaaacggaattaaatatttaggtgagttagtactt
atgagtgaagttgaagttaaaaatataaaaaatcttggaacaaaatcttataatgaaata
gctgaaaagttagaatcattaggttatccagttgaaaatacacttccagaaaatattgct
tcttctttaagaagaaaattagagcaattaaaagcataa
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