Aliarcobacter trophiarum: ATR_1192
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Entry
ATR_1192 CDS
T06356
Symbol
sbcC
Name
(GenBank) DNA repair exonuclease SbcCD, ATPase subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
atp
Aliarcobacter trophiarum
Brite
KEGG Orthology (KO) [BR:
atp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atp03400
]
ATR_1192 (sbcC)
DNA repair and recombination proteins [BR:
atp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ATR_1192 (sbcC)
Archaeal homologous recombinant proteins
ATR_1192 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
SMC_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AXK49051
UniProt:
A0A4Q0ZVB6
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All DBs
Position
complement(1148169..1151312)
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILKIKSLNINSLKGEFEVDFDKFLKDESLFAITGPTGAGKSTILDVITCALYGRTARL
TNPNELMSRHTGECLCEVEFEVKGKVYRSSWSQKRARKSSDGAFQSAKMEISEVETGKVL
ESYLSKVPKYIEDLSGLDFDRFIQSMMLAQGSFDAFLKAKENERSSLLEKITGTQIYKQI
SQEIYQTYTRKNDEIKLDESLLGNIELLSNEVIGEKTLILNSSKTHKLELDSKGNELKKV
INWLENLQKLEAANIKYIQEFEQVTLEKENKKEDFIRLDFANKALNVQPIYQEKNSLTQI
INQDKEKLEKLQKELEDLKQLLESTTNESLKSKDELDKEKISFDTNSKKLQEVRTLQTQI
NSKVDTQKEKNRKILNQKQELATLFKIDFQDMIEDEELISQNYIAQKNKIKNIESDLETI
LGEFTKIEEKTLNLNEQENNLRKELKLTEELLKNIEQYEKLSINIQNEKKLIDELEQQIK
SQNSINIEKVKLITQIEENLQILKDKKEKELLIKNYEEDRKKLQSGKECFLCGSKEHPYI
THSLNIDINITTIKLKEQEDLKDKESNELKQSEINIAKFTSKIESSNLEIQKLEAQQTAN
QEFFVSCNFQIKEDSKTTLQEQRISCEQELNELIELRDEKDKISRQKELIQANLNQKIQE
QIKTDNLINTMNEIKNELVILNQDIQTLQIKSKAILDVVDLNIFEKEITSKFNIINEKYN
SLSKELVNLNSKNESLNTQIIELNQKQINYNTKLEETKQNFTKALVENSFTSKEEFEKAL
LSKELREELNLMCKELDEKYNQIQTLKNDTIKKLQEQKELNLTDKELQTLNDESKELQTV
IDELQKSIGSLEKELEINASNMKKHEDKINDLEKKKEAFKVWIKLNEMVGSASGDKFAKF
AQGITLDQLIYLANKHLQILSPRYELKRSSDSSKLLEIEIIDGFQGDVVRPVSTLSGGES
FIVSLSLALGLSALASQRISIDSLFLDEGFGTLDSDSLELALNALNQLQSSGKMVGVISH
VEALKERIPLQIRVMPKGDGTSILDLN
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattaaaaataaaatcattaaatattaactcactaaaaggtgagtttgaagta
gactttgataagtttttaaaagatgaatctttatttgctattactggaccaactggtgct
gggaaaagtactattttagatgtaattacttgtgctttatatggaagaactgcaagactt
acaaatccaaatgagctaatgagtagacatacaggggaatgtttatgtgaagttgaattt
gaagtaaaaggaaaagtttatagaagttcttggagtcaaaaaagagctaggaaaagttct
gatggagcttttcaaagtgctaagatggaaattagtgaagttgaaacaggaaaagtttta
gaatcatatctttctaaagttccaaaatatatagaagatttaagtgggcttgattttgat
agatttattcaatctatgatgttggctcaaggaagctttgatgcttttttaaaagcaaag
gaaaatgagcgttcaagtttactagaaaagattactggaacacaaatctataagcaaata
tcacaagaaatatatcaaacatatactagaaaaaatgatgagattaaattagatgaaagt
ttattaggtaatattgaactgttgtctaatgaagttattggtgaaaaaactttaatttta
aacagttcaaaaactcataaactagaactagattctaaaggaaatgagctaaaaaaagta
ataaattggcttgaaaacttacaaaaactagaagctgctaatattaagtatatacaagag
tttgaacaagttactcttgaaaaagagaataaaaaagaagattttatcagattagatttt
gcaaataaagctttaaatgttcaaccaatttatcaagaaaaaaactctttaactcaaata
ataaatcaagataaagaaaagctagaaaaacttcaaaaagagttagaagatttaaaacaa
ctcttagaatcaacaacaaatgaatcattaaaatcaaaagatgaattagataaagaaaaa
atttcatttgatacgaactctaaaaaacttcaagaagtaagaacactacaaactcaaata
aatagtaaagtagatacacaaaaagagaaaaatagaaagattttaaatcaaaaacaagag
ttagcaactctttttaaaatagattttcaagatatgattgaagatgaagaactaatttct
caaaattatatagcacaaaaaaataaaataaaaaatattgagagtgatttagaaactatt
ttaggtgagtttacaaaaatagaagaaaaaactttaaatttaaatgaacaagaaaataac
ttaagaaaagaacttaaacttacagaagaacttctaaaaaacatagaacaatatgaaaaa
ctatctataaatattcaaaatgagaaaaaacttatcgatgaattagaacaacaaatcaaa
agccaaaatagcataaatatagaaaaagtaaaactaattactcaaatagaagaaaatcta
caaatcctaaaagataagaaagagaaagaactattaataaaaaactatgaagaggatagg
aaaaaactacaaagtgggaaagagtgttttttatgtggttcaaaagagcatccatatata
acacactctttaaatatagatataaatataacaactataaaactaaaagaacaagaagat
ttaaaagataaagagagtaatgaattaaaacaatctgaaataaatattgcaaaatttact
tcaaaaatcgaatcatctaatcttgaaatacaaaagttagaagctcaacaaacagctaac
caagagttttttgttagttgtaacttccaaatcaaagaagattcaaaaacaacactacaa
gaacaaagaatatcttgtgaacaggagttgaatgaactaatagaactaagagatgaaaaa
gataagatttctagacaaaaagagcttatacaagcaaatctaaatcaaaaaatccaagaa
caaataaaaactgataatctaatcaatactatgaatgaaatcaaaaatgagctagtaatt
ttaaatcaagatattcaaacacttcaaataaaaagtaaagctattttagatgtagttgat
ttaaatatctttgaaaaagagataacaagtaaatttaacattatcaatgaaaaatataac
tctttatcaaaagagttagtaaatctaaattcaaaaaatgagtcattaaatactcaaata
atagagctaaatcaaaaacaaatcaattataatacaaaactagaagagacaaaacaaaac
tttacgaaggctcttgtagaaaatagttttacttcaaaagaagagtttgaaaaagcactt
ttatcaaaagagttaagagaagaattaaatttgatgtgtaaggaactagatgaaaaatac
aatcaaatccaaactctaaaaaatgacacaataaaaaaactacaagaacaaaaagagtta
aacctaacagataaagaacttcaaactttaaatgatgaatcaaaagagttacaaactgtt
attgatgaacttcaaaaatcaataggaagtttagaaaaagagcttgaaatcaatgcttca
aatatgaaaaaacatgaagataaaattaatgatttagaaaagaaaaaagaagcctttaaa
gtatggataaaactaaatgaaatggtaggttcagcaagtggtgataaatttgccaaattt
gcacaaggtataacactagaccagttaatctatctagcaaataaacatctacaaatacta
agtcctagatatgaacttaaaagaagtagtgactcaagtaagctattagaaatagaaata
attgatggtttccaaggtgatgtagtaagacctgtaagtacactttcaggaggggaaagt
tttatagtaagtctctcacttgcccttggtctttcagcacttgcaagtcaaaggataagt
atagattcacttttcttggatgagggatttggaacactagatagtgatagtttagaacta
gcactaaatgcactaaatcaactacaaagttcaggaaagatggtaggtgtgatttcccat
gtggaagcactaaaagagcgaattccattacagattagggttatgcctaagggtgatggg
acgagtattttggatttaaattaa
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