Aliarcobacter trophiarum: ATR_1771
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Entry
ATR_1771 CDS
T06356
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
atp
Aliarcobacter trophiarum
Pathway
atp03030
DNA replication
atp03430
Mismatch repair
atp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATR_1771 (holA)
03430 Mismatch repair
ATR_1771 (holA)
03440 Homologous recombination
ATR_1771 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atp03032
]
ATR_1771 (holA)
03400 DNA repair and recombination proteins [BR:
atp03400
]
ATR_1771 (holA)
Enzymes [BR:
atp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATR_1771 (holA)
DNA replication proteins [BR:
atp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ATR_1771 (holA)
DNA repair and recombination proteins [BR:
atp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ATR_1771 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Dict-STAT-coil
MAPB1_N
Motif
Other DBs
NCBI-ProteinID:
AXK49594
UniProt:
A0AAD0VMU6
LinkDB
All DBs
Position
complement(1706966..1707946)
Genome browser
AA seq
326 aa
AA seq
DB search
MYKSEFDKYLKANKRFSSYMFYGQSTFLVEQYSYLVSKLIAKDEEIEKLYFEEYNFKYTK
DRLLQSSLFSSNNVILVKIDKKIPKKELDILVEAANTNKDSTLILACMGDVDFKSMESSF
SAKQNACAVRFFALMTNEALAFLQNEAKRLKIDYDESALNHLYFMHKQDISLSTNDLNKL
LILNEKVTTKLVDLHCFGVGSVNFDDFLYDLIAFKDIGNDLALLLEEGLNEIFILNQISS
FIQQLFMISSHARIFSVVNPIEVLGYNPPKHIWEKKSKLAINIKPKQFLGMLEYILNLEL
AIKTEKIDNINLYLQASLRKFIVLFR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaagtgaatttgataaatatttaaaggcaaacaaaagatttagttcttatatg
ttttatggtcaatcaacatttttggttgagcaatactcatatttagtttcaaagttaata
gcaaaagatgaagagatagagaaactatattttgaagagtataactttaaatatacaaag
gatagacttcttcagtcatctttattttcatcaaataatgtaattttggtgaaaatagat
aaaaaaattccaaaaaaagagctagatattctagttgaagctgcaaatacaaataaagat
agtactcttattttggcttgtatgggagatgtagattttaaatctatggagagtagtttt
agtgctaaacaaaatgcttgtgcagttaggttttttgctttaatgacaaatgaagcatta
gcttttttacaaaatgaagcaaaaagattaaaaatagattatgatgagagtgcattaaat
catctctattttatgcataaacaagatatctctcttagtacaaatgatttaaataaattg
cttattttaaatgaaaaagttactacaaaacttgttgatttacactgttttggagtagga
agtgtaaattttgatgatttcttatatgatttaattgcttttaaagatatagggaatgat
ttagctcttctattggaagagggtttaaatgagatttttattttaaatcaaattagctca
tttattcaacaactatttatgattagttctcatgctagaattttttctgttgtaaaccct
attgaggttttgggatacaatcctccaaagcatatttgggagaaaaaatcaaaattagca
ataaatataaaaccaaaacaatttttggggatgttagagtatattttaaatttagaacta
gctataaaaacagagaaaatagataatataaatttatatttacaagcaagtttaagaaaa
tttatagttttatttagataa
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