KEGG   Aliarcobacter trophiarum: ATR_1798
Entry
ATR_1798          CDS       T06356                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
atp  Aliarcobacter trophiarum
Brite
KEGG Orthology (KO) [BR:atp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:atp03016]
    ATR_1798 (truA)
Enzymes [BR:atp01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     ATR_1798 (truA)
Transfer RNA biogenesis [BR:atp03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    ATR_1798 (truA)
 Prokaryotic type
    ATR_1798 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AXK49621
UniProt: A0AAD0VNJ3
LinkDB
Position
complement(1732637..1733368)
AA seq 243 aa
MSINLKFTISYDGSSFLGSQKQPSKITVEDELLRAFKSINIDTKIVLSGRTDRDVHATGQ
VFNCFVPNYWEDFYKLKEILNKRLPNSIKIKDIVKVKDDFHSRFSAKKRIYRYIVTTKPT
TPFNSKYITYIKNIDEPLLRSAIKEFIGVYDFLYFQKTGSQKEITKREIFSTKFYKYRDI
YVFKFCANSYLRSQIRLMVGFLLAINDKKLNINDLKQQLNCEKCIFKTPISPNGLYLAKI
IYK
NT seq 732 nt   +upstreamnt  +downstreamnt
ttgagtataaacttaaagtttactatctcttatgatggaagctcttttttaggaagtcaa
aaacaaccaagtaaaataacagtagaagatgagcttttaagagcttttaaaagtataaat
attgatacaaaaatagttttaagtggaagaacagatagagatgttcatgcaacagggcaa
gtttttaactgttttgttccaaattattgggaagatttttataaactgaaagagatttta
aataagagacttccaaattcaataaagataaaagatatagtaaaagtaaaagatgatttt
cactcaagatttagtgcaaaaaagagaatttatagatatatagttactacaaaaccaaca
actccatttaattcaaaatatataacttatataaaaaatattgatgagccactcttaaga
agtgcaataaaagagtttataggagtttatgatttcttatactttcagaaaacaggaagc
caaaaagagattacgaaaagagagatattttctacaaaattttataaatatagagatatt
tatgtatttaaattttgtgcaaactcttatttgagaagccaaataaggcttatggttggg
tttttgttggcaataaatgataaaaagctaaatataaatgatttaaaacaacagttaaat
tgtgaaaagtgtatttttaaaactcctataagtccaaatggtttatatttggcaaagatt
atttataaatga

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