Aliarcobacter trophiarum: ATR_1866
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Entry
ATR_1866 CDS
T06356
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
atp
Aliarcobacter trophiarum
Brite
KEGG Orthology (KO) [BR:
atp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atp03032
]
ATR_1866 (topA)
03400 DNA repair and recombination proteins [BR:
atp03400
]
ATR_1866 (topA)
Enzymes [BR:
atp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ATR_1866 (topA)
DNA replication proteins [BR:
atp03032
]
Prokaryotic type
DNA Topoisomerases
ATR_1866 (topA)
DNA repair and recombination proteins [BR:
atp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ATR_1866 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AXK49681
UniProt:
A0AAD0VNN0
LinkDB
All DBs
Position
complement(1800374..1802680)
Genome browser
AA seq
768 aa
AA seq
DB search
MKNLVIVESPAKAKTISKFLGPDYVVMASMGHVRDLPKSTLGFDPEDNFKPNYQVSTDKK
KVISELKKQISKDTTIYLAADEDREGEAIAWHLIPALKIEKNPIKRIVFHEITKDAILKA
LQNPRDVDQNLVDAQQARRILDRAVGYELSPLLWKKVRYGLSAGRVQSVAVKIIVDRENE
IRAFVPEEFWKIKADFINPELSSELSKKDGKNLKVKNEKQAKEIETSLNSGIYKLVDIEE
KDSTRNPAPPFTTSTLQQEASRKIGLSVAQTMMIAQQLYEGNVENIPNHTGGLITYMRTD
SLNLSTVATSMAKKVIEEEYGKDYSLSKPRAFKSTAKGAQEAHEAIRPVDMSLKPTLVKQ
YLDNAQYKLYSLIWKRTIATQMATAKIANTTYKIEAGAKNEFEFQTKGQRIIFAGFMKAY
TEGSDNPESALDSTEKILPNIKVGTVLELEKLSSEQNFTKPPARYTEASLVKKLESEGIG
RPSTYAPTISTIQAREYVVKTEDKKLAPTPTGEIVNSFLTDHFSNIIDLGFTARIEEEFD
EIADGKKVWVDVMRNFYGDFKETIKDKEENISKSDYLQVRELGIDPKSGKPVSARVGRFG
PFIQIGTKDDEEKPKFVAIPEKFNMDTITLEEALFLFTLPRVVGTTLNNEEIKANIGRFG
PYLQVKTKYYSLKTDDPYTVDEQRAREIINEIDEAKSKALIKEFEKEKIQILDGQYGPYI
KQGRKNFKIPKTKEASSLTLEECLEIIEKDSKVTKKPARKVVKKTVKK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaatttagtaatagtggaatctccagcaaaagcaaaaacaatctcaaaattttta
ggccctgactatgtagttatggcatctatggggcatgtaagagatttaccaaaatcaact
ctaggatttgatcctgaagataacttcaaaccgaactatcaagtaagtacagataaaaaa
aaggttatatcagagttaaaaaaacagatatcaaaagatacaactatatacctagcggcc
gatgaggatagagaaggagaggctattgcttggcatttaataccagcattaaaaattgaa
aaaaacccaataaaaagaatagtttttcacgaaattacaaaagatgcaatactaaaggca
cttcaaaacccaagagatgttgatcaaaatcttgtagatgctcaacaagcaagaagaatt
ttagatagagcagttggatatgaactttcaccattactttggaaaaaagtgcgatatggc
ttgagtgctggaagagttcaaagtgttgcagtaaaaataattgttgatagagagaatgag
ataagagcttttgttcctgaagagttttggaaaataaaagcagattttataaatcctgaa
ctttcaagtgaattatcaaaaaaagatggcaaaaatttaaaagtaaaaaatgaaaaacaa
gcaaaagagattgaaacatctttaaatagtggtatatacaaacttgtagatattgaggaa
aaagatagtacaagaaatccagcacctccatttacaacttcaactttgcaacaagaagca
agtagaaaaataggtcttagtgttgcacaaactatgatgattgctcaacaactttatgaa
ggaaatgttgaaaatattccaaatcacacaggtggtttgattacatatatgagaacggac
tctttaaacctatcaactgttgctacttctatggctaaaaaagttattgaagaggagtat
ggaaaagattattctctttctaaaccaagagcttttaaatcaactgcaaaaggtgcacaa
gaggcacacgaagcaataagacctgttgatatgagcttaaaaccaactcttgttaaacag
tatttagataatgcccagtataaactatatagcttaatttggaaaagaactattgctact
caaatggcaactgcaaaaattgctaacactacatataagatagaagctggagctaaaaat
gagtttgagttccaaacaaagggtcaaaggattatttttgctggatttatgaaagcttat
acagaaggtagtgataatccagagagtgcacttgatagtactgaaaaaatattaccaaat
ataaaagttggaacagttttagagttagaaaaactaagtagtgagcaaaactttactaaa
ccaccagcacgatatacagaagcttcacttgtaaaaaaacttgaaagtgagggaataggt
cgtccttcaacttatgctccaactatttcaactattcaagcacgagagtatgtggtaaaa
acggaggataagaaactagcacctacaccaacaggtgagattgtaaatagctttttaact
gatcatttctcaaatattattgacttaggatttactgcgagaattgaagaagagtttgat
gaaatagcagatggtaaaaaagtttgggttgatgtaatgagaaacttttatggagacttt
aaagagactataaaagataaagaagaaaatataagtaaatcggattatctacaggtgaga
gaacttgggatcgatccaaaaagtgggaaacctgtaagtgctagagttggaagatttgga
ccttttattcaaattggaacaaaagatgatgaagagaaaccaaaatttgtagcaattcct
gaaaagtttaatatggatacaattactttggaagaagctctgtttttatttacacttcca
agagttgttgggactactttaaataatgaagagataaaagcaaatattggaagatttggt
ccatatttacaagtaaaaacaaaatattactcattaaaaactgatgatccatatacagtg
gatgagcaaagagcaagagagattataaatgaaattgatgaagctaaaagtaaagctttg
ataaaagagtttgaaaaagagaaaattcaaattttagatggtcaatatggtccatatata
aaacaaggtagaaagaattttaaaataccaaaaacaaaagaggcttcaagtttaacttta
gaagagtgcttggaaataatagaaaaagatagcaaagttacaaaaaaacctgctagaaaa
gtagttaaaaaaacagtaaaaaaataa
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