Actinomarinicola tropica: GH723_00055
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Entry
GH723_00055 CDS
T06914
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
atq
Actinomarinicola tropica
Pathway
atq02020
Two-component system
atq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
atq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GH723_00055
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GH723_00055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atq03021
]
GH723_00055
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
atq02035
]
GH723_00055
Transcription machinery [BR:
atq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GH723_00055
Bacterial motility proteins [BR:
atq02035
]
Flagellar system
Flagellar assembly proteins
Stator
GH723_00055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_28
YdaS_toxin
HNH_repeat
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
QGG93630
UniProt:
A0A5Q2RIG3
LinkDB
All DBs
Position
11771..12739
Genome browser
AA seq
322 aa
AA seq
DB search
MPSRLSYRVPERVVHGMGGRSRSGLQEGEYTMADNQDLSKRIEENLPLVKHIVFQVAVHF
PRHVDREELARAGALGLVEAARRYDDDRGVPFERFAAQRIRGAILDAVRAADWAPRSVRT
LARRLEAAEQRLASQLGRVPSPAEMADELGISRAELNRLQDRMFRSVVLALEHEVTDDTD
EDLTLVDVLTDQSCIEPLEELESREMLGYLRDAVSLLPERQRIVVVGYFLEGRTSQDLAR
FLGVTESRISQLRSEALEMLREGIESQYAPAADDAPSGRVARRKANYAAAISAASDWRDR
LDFVDDHSVPEEPPVPVGARWS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgccctcacggttgtcttaccgggtacccgaaagggtcgtacacgggatgggcggtcgg
agccgttcggggctccaggaaggcgagtacacgatggctgacaaccaggacctgtcgaag
cggatcgaggagaacctcccgctcgtcaagcacatcgtgttccaggtcgccgtccacttc
ccacggcacgtcgaccgcgaggagctggcccgggccggcgccctcgggctcgtcgaggcg
gcccgccgctacgacgacgaccggggcgtccccttcgagcgcttcgccgcacagcggatc
cgtggtgccatcctcgacgccgtccgggccgccgactgggcgccccgctcggtgcgcacc
ctcgcccgccgcctcgaggccgccgagcagcgcctcgccagccagctcggccgggtgccg
agccccgcggagatggccgacgagctcggcatctcccgcgccgagctcaaccggctccag
gaccgcatgttccgctccgtcgtcctggccctcgagcacgaggtcaccgacgacaccgac
gaggacctcacgctggtcgacgtcctcaccgaccagagctgcatcgagcccctcgaggag
ctcgagagccgcgagatgctcggctacctgcgcgacgccgtgtcgctgctgcccgagcgc
cagcgcatcgtggtcgtcgggtacttcctcgagggccgcacctcccaggacctggcccgc
ttcctcggcgtcaccgagtcccgcatctcccagctgcgctccgaggcgctcgagatgctg
cgcgagggcatcgagtcgcagtacgccccggccgccgacgacgccccgagcgggcgggtg
gcgcgccgcaaggccaactacgccgcggcgatctcggccgccagcgactggcgtgaccgg
ctggacttcgtcgacgaccactcggtccccgaggagcccccggtccccgtcggcgcccgc
tggagctag
DBGET
integrated database retrieval system
