Actinomarinicola tropica: GH723_01265
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Entry
GH723_01265 CDS
T06914
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
atq
Actinomarinicola tropica
Pathway
atq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GH723_01265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atq03021
]
GH723_01265
03400 DNA repair and recombination proteins [BR:
atq03400
]
GH723_01265
Enzymes [BR:
atq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GH723_01265
Transcription machinery [BR:
atq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GH723_01265
DNA repair and recombination proteins [BR:
atq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GH723_01265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Biotin_lipoyl_2
Peptidase_M23
Speriolin_C
Motif
Other DBs
NCBI-ProteinID:
QGG93845
UniProt:
A0A5Q2RKX6
LinkDB
All DBs
Position
252711..256313
Genome browser
AA seq
1200 aa
AA seq
DB search
MSSRSSARARYSFANLDEVLDLPDLIAIQRASFEWFLDHGLAETFADISPIKDFTETLQL
ELEFDPNDEDLRPPPKFSVDECKEKDMTYSAPIFVRARFMNATTGEIKEQTVFMGDFPMM
TDKGTFVINGTERVVVSQLVRSPGVIFQPGERFRLRNLAKHQLVTGTIHPYRGEWIEFDV
EQKPGKDVTAGTRVARKRRLSLFVLLRALGYDEENHPGFLDNFVRHFDFLEGQWEKDREL
APTQDEALVEIYKRARPGEPPSVESAKAYFKNAFFEPRRYDLSRVGRYKLNRKLGPELDK
IEQLFGIQLERPESDQSVLTPAEILAATTYLLNLVNAEPGYRLDDQDHFANRRIRSVGEL
IQNQVRIGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQLSQFMDQVN
PLSGLTHRRRLSALGPGGLSRERAGFEVRDVHFSHYGRMCPIETPEGPNIGLIGALSSFA
RVNEFGFIESPYRKVIDGKVTDEVVYLAADEEEEYVVAQANAPLNPDGTFKNDRVLVRRS
PQAATLGELKLQLERDVFFGATTEISSVAPEEVQLMDISPKQIVSVAAALIPFLEHDDAN
RALMGANMQKQAVPLVKAEAPYIGTGIEDKVARDAGDMILAEDDGTVASVDGTQVTVEYK
GGRKKIHRLLKFERSNQDTCINQKVRVAKGDKVKKGDLLADGPSTEEGELALGKNLLVAF
MPWEGYNFEDAIILSERLVKDDVLTSIHIHEHEIDARDTKLGPEEITRDIPNLSEEILAD
LDERGIIRIGAEVDAGDVLVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGE
SGKVIDVKVFSRDDGDELPPGVNQLVRVYVGQKRKISVGDKLAGRHGNKGVISKILPIED
MPFMADGTPVDILLNPLGVPSRMNVGQVLESHLGYAARWGWDLTGDGKIDVGDEPVRGTE
RKTRTNTPPSTLIATPVFDGAKYDEVEDAGKHPTIQQIFGALHPEATDERYGDGGRLIRP
DGKTTLFNGRTGEPYDNPITVGYMYIIKLAHLVDDKIHARSTGPYSMITQQPLGGKAQFG
GQRFGEMEVWALEAYGAAYCLQELLTIKSDDVLGRVKVYEAIVKGENIPEPGIPESFKVL
IKEMQSLCLNVEVLSTTGEEIEMRELDEDIFRTAEELGIDLSRPERGSDEEDARRQAERG
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctcccgctcttctgcccgggcccgctactcgttcgcgaacctcgacgaggtcctg
gatctcccggacctcatcgcgatccagcgagcgtccttcgagtggttcctcgatcacggt
ctcgccgagaccttcgccgacatcagccccatcaaggacttcacggagaccttgcagctg
gagctggagttcgaccccaacgacgaagacctgcgcccgcccccgaagttctcggtggac
gagtgcaaggagaaggacatgacctacagcgcgccgatcttcgtgcgcgctcgcttcatg
aacgccaccaccggcgagatcaaggagcagacggtcttcatgggggacttcccgatgatg
accgacaagggcaccttcgtcatcaacggcaccgagcgcgtcgtcgtgtcccagctcgtg
cgctcgcccggcgtcatcttccagcccggtgagcggttccgcctccgcaacctggccaag
caccagctcgtcaccggcaccatccacccctaccggggcgagtggatcgagttcgacgtc
gagcagaagccgggcaaggacgtcaccgccggcacccgcgtggcccgcaagcgccgcctc
agcctgttcgtcctcctccgggccctcggctacgacgaggagaaccaccccgggttcctc
gacaacttcgtccgccacttcgacttcctcgaggggcagtgggagaaggaccgcgagctg
gccccgacccaggacgaggccctcgtcgagatctacaagcgggcccgtccgggcgagccg
ccgtcggtcgagtcggccaaggcctacttcaagaacgccttcttcgagccccggcgctac
gacctgtcgcgggtcggtcgctacaagctcaaccgcaagctcggccccgagctcgacaag
atcgagcagctgttcggcatccagctcgagcgccccgagtccgaccagtcggtgctcacg
ccggccgagatcctcgccgccaccacctacctgctgaacctggtcaacgccgagccgggc
taccgcctcgacgaccaggaccacttcgccaaccgccgcatccggtcggtcggcgagctg
atccagaaccaggtgcgcatcggcctctcccgcatggagcgggtcgtgcgcgagcgcatg
accacccaggacgtcgaggcgatcacgccccagacgctcatcaacatccggccggtcgtc
gccgcgatcaaggagttcttcgggacctcccagctgtcgcagttcatggaccaggtcaac
cccctgtcgggcctcacccaccgccgtcgcctctcggcgctcggcccgggtggcctctcg
cgtgagcgggcgggcttcgaggtccgcgacgtgcacttctcgcactacggccgcatgtgc
ccgatcgagacgccggagggcccgaacatcggcctgatcggcgcgctcagctcgttcgcc
cgggtgaacgagttcggcttcatcgagtcgccgtaccgcaaggtgatcgacggcaaggtc
accgacgaggtcgtctacctcgccgccgacgaggaggaggagtacgtcgtcgcccaggcg
aacgcccctctcaaccccgacggcacgttcaagaacgaccgcgtgctcgtgcggcgctcc
ccgcaggccgccacgctcggcgagctgaagctccagctcgagcgggacgtcttcttcggc
gccaccaccgagatctcctcggtggccccggaggaggtccagctgatggacatctccccg
aagcagatcgtctcggtcgccgccgccctcatccccttcctcgagcacgacgacgccaac
cgggccctgatgggcgccaacatgcagaagcaggcggtgcccctcgtcaaggccgaggcg
ccgtacatcggcaccggcatcgaggacaaggtcgcccgcgacgccggcgacatgatcctc
gccgaggacgacggcaccgtcgcctcggtcgacggcacccaggtcaccgtcgagtacaag
ggcggccgcaagaagatccaccgcctcctcaagttcgagcgctcgaaccaggacacctgc
atcaaccagaaggtgcgggtcgccaagggcgacaaggtgaagaagggcgacctcctcgcc
gacggcccctccaccgaggagggcgagctggccctcggcaagaacctcctcgtggccttc
atgccgtgggagggctacaacttcgaggacgccatcatcctctccgagcgcctggtgaag
gacgacgtgctcacgtcgatccacatccacgagcacgagatcgacgcccgcgacaccaag
ctcggccccgaggagatcacccgggacatcccgaacctctctgaggagatcctcgccgac
ctcgacgagcgcggcatcatccgcatcggcgccgaggtcgacgccggcgacgtgctcgtc
ggcaaggtgacgccgaagggcgagaccgagctcacccccgaggagcgcctcctgcgcgcc
atcttcggcgagaaggcccgcgaggtccgcgacaccagcctcaaggtgccccacggcgag
tccggcaaggtcatcgacgtcaaggtgttcagccgcgacgacggcgacgagctcccgccc
ggcgtcaaccagctcgtgcgggtctacgtcggccagaagcgcaagatcagcgtgggcgac
aagctcgccggccgccacggcaacaagggcgtcatctccaagatcctcccgatcgaggac
atgcccttcatggccgacggcacgcccgtcgacatcctgctcaacccgctcggcgtcccg
tcccgcatgaacgtgggccaggtgctcgagtcgcacctcggctacgcggcccgctggggc
tgggacctcaccggcgacggcaagatcgacgtcggcgacgagccggtccggggcacggag
cgcaagacgcgcaccaacaccccgccgtccacgctcatcgccactccggtgttcgacggc
gccaagtacgacgaggtcgaggacgccggcaagcacccgacgatccagcagatcttcggt
gcgctgcacccggaggccaccgacgagcgctacggcgacggcggccggctcatccggccc
gacggcaagaccacgctgttcaacggccgcaccggcgagccctacgacaacccgatcacc
gtcgggtacatgtacatcatcaagctcgcccacctcgtggacgacaagatccacgcccgg
tcgaccggcccctactcgatgatcacccagcagccgctcggcggtaaggcccagttcggt
ggccagcgcttcggtgagatggaggtgtgggcgctcgaggcctacggcgcggcgtactgc
ctccaggagctgctgaccatcaagtccgacgacgtcctcggccgcgtgaaggtctacgag
gcgatcgtcaagggcgagaacatccccgagccgggcatccccgagagcttcaaggtgctc
atcaaggagatgcagtcgctctgcctgaacgtcgaggtgctctcgacgacgggcgaggag
atcgagatgcgcgagctcgacgaggacatcttccgcacggccgaggagctgggcatcgac
ctgtcccgccccgagcgcggaagcgacgaagaggacgcccgccgtcaggccgagcggggc
tga
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integrated database retrieval system
